Cucurbita pepo subsp. pepo (vegetable marrow): 111778594
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Entry
111778594 CDS
T05351
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111778594
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpep01002
]
111778594
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111778594
04121 Ubiquitin system [BR:
cpep04121
]
111778594
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111778594
Peptidases and inhibitors [BR:
cpep01002
]
Metallo peptidases
Family M67
111778594
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Others
Others
111778594
Ubiquitin system [BR:
cpep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
111778594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
111778594
NCBI-ProteinID:
XP_023514277
LinkDB
All DBs
Position
LG17:complement(337597..342382)
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AA seq
502 aa
AA seq
DB search
MKINIDREARKVGVDNRIPLRNYYRIADNLLKQANIYREENNIVDLFIILLRFSSLVSET
IPRHRDYLAFFPKEKIFYKKKLLSVVDELESLKPEFDRRVNELEKVYGRSRLPPPDEQEI
VSNSRRPSPYVNGKFSLILDQKQHANLQPQSSLRYNDDRGLVSQSSSVRIENKFSNLSIN
VPLPKPETLSRHSILGPNGLQGQWKGPSTDKILYPRNQDYTSEDSRLNQIEQCDLVAQKD
GGPGGVTSMMESVLSLDDGLWPHPADMSTPPLIAEVREDPFTLVKQPSPPPVLAKVQQEY
ATIPPSKVADPRPGVAKQSQDGPEFQHLHIPVKMLDDFLRLARENTNKNLETCGVLAGSL
KNRVFYISTLIVPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPSQTCFMSSVDL
HTHYSYQIMLPEAIAIVMAPTDESSPYGIFHLSDPGGVSVIRNCQQRGFHPHEEPEDGSP
LYEHCSHVLMNPNSKFDVIDLR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaacatcgatagggaggcgcggaaagttggggttgataatcgaattcccctt
cggaattactatcggatcgccgataatctcctaaaacaggctaatatttatcgggaggag
aataatattgtggatttgttcattatacttcttaggttttcaagcttggtttctgaaact
ataccacggcatcgtgattacctagcttttttcccaaaggaaaagatattttataagaag
aaactgttgagtgtagtagatgaacttgagtccttgaagcccgaatttgatcgccgagta
aatgaactggagaaagtgtatggacggtctcgtcttcctccacctgatgagcaggaaata
gtttcaaacagtcgtcggccatctccctatgtgaatggaaaattttcattaatcttggat
caaaagcagcatgccaatttacaaccacaatcttcattgaggtataatgacgaccgaggt
ctagtttcacaatcaagttctgtaaggattgagaataagttctcaaatctgtctatcaat
gtaccgcttcccaaacccgaaactttgtctagacattctattttgggtcccaatggtctt
cagggccaatggaagggaccgagtacagacaagattctctatccaagaaatcaggattat
acttctgaagattcaagactgaatcaaattgaacaatgtgatctagtggcacaaaaagat
ggtggtccaggaggtgttacgtcgatgatggagtcggtactctcgctagacgatggcctt
tggcctcatcctgcagacatgtctactcctccattgatagcagaagtaagggaagatcct
ttcacattggtcaaacagccttctcctcctcctgttcttgctaaggttcagcaggaatat
gcgacgattcccccatctaaagttgcggatccaaggcctggagtggcaaaacaatcacag
gatggacctgagtttcaacatttacacattccagtaaaaatgctggatgatttcttgaga
ttggcccgagaaaatacaaataagaatctggagacttgtggtgttttagctggctcactg
aaaaacagggttttttacatatctacgctcatagtcccgaagcaagaatcaacatcagat
tcctgccaaacgttgaatgaggaggaaatatttgaagttcaagacagattatcacttttc
cctcttggttggatccatacacacccatcacaaacgtgtttcatgtcatctgtggatttg
cacacacattactcgtaccagattatgctaccagaagctattgcaatcgtcatggctcct
acggatgaatcaagtccatatggaatatttcatctgtccgatccaggtggtgtgtcggtc
atccgcaactgccaacagcgcggatttcatccccatgaggagcctgaagatgggagtcca
ctctatgagcactgctctcatgttttgatgaatcccaactcgaagtttgacgttatcgat
ctaaggtaa
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