Cucurbita pepo subsp. pepo (vegetable marrow): 111778755
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Entry
111778755 CDS
T05351
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00450
Selenocompound metabolism
cpep00970
Aminoacyl-tRNA biosynthesis
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
111778755
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111778755
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpep01007
]
111778755
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111778755
Enzymes [BR:
cpep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
111778755
Amino acid related enzymes [BR:
cpep01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111778755
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111778755
Prokaryotic type
Other AARSs
111778755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
CoV_peptidase
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
111778755
NCBI-ProteinID:
XP_023514495
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All DBs
Position
LG17:complement(1765589..1773704)
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AA seq
806 aa
AA seq
DB search
MGDVSGDAAAGGTKAIILPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRL
RGYNTIYICGTDEYGTATETKAMEEKCSPKEICDKYHAIHKEVYNWFGISFDEFGRTSSP
QQTEVCQAIFGKLLENNWLSENTMQQLYCDTCERFLADRLVEGICPTPGCEYDSARGDQC
EKCGKLLNPTELKDPRCKVCQTTPRIRDTNHMFLELPLLRNKLEEYINKTSVAGSWSQNA
IQATNAWLKEGLKPRCITRDLKWGVPVPLERFKDKVFYVWFDAPIGYVSITSCYTNEWEK
WWKNPENVELFQFMGKDNVPFHTVMFPSTLLGTGEDWTLMKTISVTEYLNYEAGKFSKSK
GVGVFGNDAKDTNIPVEVWRYYLLANRPEVSDTLFTWADLQAKLNGELLNNLGNFIHRVL
SFIAKPLGQGYGSIIPDVSDADSHGLTLGLAEKVGKYVDQYVESMEKVKLKQGLKSAMAI
STEGNIYLQTAQFWNLYKEDKPSCNLVMRTSAGLVYLLACLLEPFMPSFSQEVFKQLNVP
VERHMSLCEEKGDIERAKQPWKILPSGHKIGTPEPLFKELKDEEVELYRDKFAGSQAQRI
VRAEAEAEKLAAQLKSTNVSGGGKKQQAKSTGSKSKAAVEPEITITRLDIRVGLITKAQK
HPDADSLYVEEIDVGESQPRTVVSGLVKYIPLEEMQNRKVCVLCNLKPAAMRGIKSQAMV
LAASNSDHTKVELVEPPKDAIVGERIKFSGFEGEPDSVLNPKKKVWETLQVDLATNGDLV
ACFKDIPFTTSAGICKVSSISSGSIR
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgtctcaggcgatgctgccgctggcggaaccaaggccataatacttccgatt
ccaggaaagaggaatattctcatcaccagcgctcttccgtacgtcaataacgttcctcac
ctcggcaacatcattggctgtgtgttgagtgctgatgtttttgctcggtactgtcggctt
agaggttataatactatttacatatgtggaaccgatgagtacggaacggcgacggagaca
aaagcaatggaagagaaatgttctcctaaagagatttgtgacaagtaccacgcaattcat
aaagaagtttataattggtttggtattagttttgatgaatttgggcgcacatcgtctcca
cagcagactgaagtttgtcaagcaatatttggaaaactgctggagaacaattggctttct
gaaaacacgatgcaacagctttactgtgatacttgtgagagatttttagccgatcggctt
gttgaaggcatctgtcccactccaggttgtgagtatgactctgcacgtggtgatcagtgt
gaaaagtgtgggaaacttctgaatccaactgaattgaaagatcccaggtgcaaggtctgt
caaacaaccccacgtatccgtgacacaaatcacatgtttcttgaacttcctttgctaaga
aataaactggaagaatatatcaacaagacgtctgtggccggatcttggagccaaaatgct
attcaagcaacaaatgcttggcttaaggaagggttgaaacctcggtgtattacaagggat
ctaaagtggggggttcctgttccccttgaaaggttcaaggacaaggtcttctatgtctgg
tttgatgcacctataggatatgtctccattacatcatgctacacaaatgaatgggagaaa
tggtggaagaatccagaaaatgtggagctttttcaattcatgggcaaggataatgttcct
ttccacacggttatgtttccttccactcttcttggaactggagaagactggaccttgatg
aaaaccattagtgttactgaatatttaaactatgaagcaggaaaattttctaaaagtaag
ggcgtaggagtctttggtaatgatgcaaaagatacaaatattcccgtagaagtatggaga
tattacttattagctaataggcctgaggtatcagatacattattcacatgggctgacttg
caagcaaagctaaatggcgagttgttgaacaatttgggcaacttcattcatcgagttttg
agcttcattgccaaacctttagggcagggttatggttccattattcctgatgtatctgat
gcggactctcatggattgacattgggtttggctgagaaagtgggtaaatacgttgaccaa
tatgtggaatcaatggagaaggttaaactaaaacaaggattgaaatctgcaatggctatt
tcaactgagggaaatatatatttgcaaacagcacagttctggaatctttacaaggaggac
aaaccttcctgcaatcttgttatgagaacttcagctggactagtttatcttctggcgtgt
ttattagaacctttcatgccttctttctcccaggaggtctttaagcagctgaatgtaccg
gtggaacggcatatgtcactttgtgaagaaaaaggagatatcgagagggcaaaacaacct
tggaagatcttaccttctggtcataagattggcacaccagagccattattcaaagaattg
aaagatgaagaagtagaactatacagagacaagtttgctggaagtcaggctcaacgcatt
gtaagagcagaagctgaagcagagaagcttgctgctcagctaaaaagcactaacgtttca
ggcggtggaaagaagcaacaggcaaaatccacaggaagcaaatcaaaagctgctgtggaa
ccagaaattacgattacaagactcgatatccgtgttggcctaattactaaagctcagaag
catcctgatgctgattccctatatgtggaagaaattgatgtgggagaatcgcaacctcga
accgttgtcagtggactagtcaagtacattcctctcgaagagatgcagaatcggaaggtc
tgtgttctttgcaacttgaagccggcagctatgaggggcattaaatcgcaagccatggtc
cttgctgcttccaatagtgaccacactaaggtcgaattagtcgagccaccgaaagatgct
attgtcggagaaagaattaaattctcaggattcgaaggcgagcccgacagcgtgttgaac
ccgaagaagaaggtatgggagacactgcaggtagatttggctactaacggagacctggtg
gcatgttttaaagatattccatttactacatctgctggtatttgcaaagtgtcctctatt
tccagtggctctatcaggtag
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