Entry |
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Name |
(RefSeq) protein RIK isoform X1
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KO |
K25780 | kelch domain-containing protein 4 |
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Organism |
cpep Cucurbita pepo subsp. pepo (vegetable marrow)
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Brite |
KEGG Orthology (KO) [BR:cpep00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:cpep03041]
111778889
Spliceosome [BR:cpep03041]
Complex B
Other components
Prp19-related factors
111778889
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
LG17:complement(4065955..4078044)
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AA seq |
622 aa
MTEDSGVRVSLDEPIAVPNIDSSSQTKPRKKRKWDQPAESFLSTGIAVPGVLPSYNMTSL
GGVAVASVAALAQVSSVNCATITQSKIQDELIAREISINDAEPSVRYKLTKRQTQEEIQR
QTGAVVITRGKYHPPNTPPDGNKPLYLHISAGVHLKDMAERILAVDRAAAMVEEMLRQGQ
NVVPLSFNSLNNDFKVNQPLTTSVFLGFDIDPSMNIAARIRGPNDQYINHIMAETGVTVS
LRGLGSGSTEGACEEPLHLFLSSNNFKSLEDAKNLTENLMDTISKEFGVSRVSSCKVYSA
VAPPQQVYGAVPPPPQVYGAIPPLLQVYGAVPPPPKVYNAVPPPLLCSTPQQLYTGVDSL
GNEPSTSSASSSISSASPTIVSQVSSVIPGAAPVITQGSILQAGLSQSQSTAISYSKPLI
SSGTNYNGYSGIYPQATPLQQVALALKQVSSTTMSVAVPNRSAPSMSNVSVSTDAEKEKR
PHQRRKFQELPICVQGSPISNQDSKLLKPSNKSAADATVRNVSNMPAPRKLVQPSSNEMP
PPRPRSMPPPPTPVKSTSTVKVIVQDKELSLDTIKPDVVSDTLVKLMEYGEEEDDDAEEG
VESLNSKNTTGGLASRKPFWAV |
NT seq |
1869 nt +upstreamnt +downstreamnt
atgacggaggacagtggcgttagggtttccttggacgaacccatcgcagttcccaatatc
gattcctcttcccaaacaaagccaagaaagaaaagaaagtgggatcaacctgcggagtcc
tttctttctactggtattgcagttccaggggttctcccgtcatacaacatgacgtccctt
ggtggggttgctgtcgccagtgtggcggcattggcacaagtttcttcagtcaactgtgca
accataacccagtcgaagatacaagatgaattaattgcaagagaaatatcaataaatgat
gcagagccttctgttcggtacaagctcacaaaacgtcagacccaggaggagattcaaaga
caaactggtgctgtggtgataacgaggggcaagtatcatcctccaaacacgcctccagat
ggcaacaagccactctatcttcacatctctgctggagtccatttgaaagatatggcagaa
aggatattagctgttgatcgagctgctgccatggttgaagaaatgctgagacagggtcag
aatgttgtgccattgtcttttaattctttaaacaatgacttcaaggttaatcagccattg
accacgagtgtattcttgggctttgacatagacccatctatgaacattgctgctcgaata
cggggaccaaatgaccagtatataaatcacataatggctgaaacaggagtaactgtctct
ctccgaggacttggttcgggaagtactgaaggtgcatgtgaagaaccattgcatttattc
ttgtctagcaacaatttcaaaagtcttgaggatgccaaaaatttgactgaaaacctgatg
gatacaatcagtaaagagtttggtgtttcaagggtttcatcatgtaaggtttatagtgct
gttgcacctccacagcaggtttatggagctgttccacctccaccacaggtttacggagct
attccacctctgcttcaggtctatggagctgttccacctccaccaaaggtttataatgct
gttccacctccactgctttgttcaacaccacagcagttgtatacaggagttgatagcttg
ggaaatgagccgagtacaagttcagcttcaagttcgatctcgtcagcttctccgaccata
gtttctcaagtttcttctgttataccaggagctgctcctgtgatcactcaaggttcaata
ttacaagctggattgtcacagtctcaatcaactgccattagttattccaagccacttata
tctagtgggacaaactataatggatatagtggaatatatcctcaagcgacacctttacaa
caagttgccctagcccttaaacaagtatcttcaactaccatgtctgtagctgtccccaac
aggtcagcaccgagcatgtcgaatgtgagtgttagcactgatgcagagaaagaaaaacgt
cctcatcagaggcgtaaatttcaagagctaccaatttgtgtgcagggttccccaataagc
aatcaggattcaaaacttttgaagccctcaaacaaatcagcagcagatgccactgtgaga
aatgtatcaaatatgcctgctcctaggaagctagttcagccttcatccaatgaaatgcca
ccacctcggccccggtccatgccgcctccacccacaccagtaaagtctacatcaacagtt
aaggttatagtgcaagataaggaactttcgttggacacaataaaacctgatgttgtctca
gatacactagtcaagctaatggaatatggagaagaagaagatgatgatgcagaggaaggc
gttgaatcattgaacagcaagaacactactggtggcttggcaagtcgaaaacctttctgg
gccgtgtag |