KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111778899
Entry
111778899         CDS       T05351                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit rpa49-like
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111778899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpep03021]
    111778899
Transcription machinery [BR:cpep03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     111778899
SSDB
Motif
Pfam: RNA_pol_I_A49 TPR_ATM
Other DBs
NCBI-GeneID: 111778899
NCBI-ProteinID: XP_023514670
LinkDB
Position
LG17
AA seq 441 aa
MRKLMAGDSKYFEETHYAEPEANSQSPAKKKKKSEKKKKRVPPVNTKIQVLSNHPEKIPP
LVGYFPSGYDPNKDPNEEAVEEQNSVRAKVYRHKKKPNRMQLVVSPTGLNVDFVGTNYLG
EATAGKQHCSYALGVLDKATQSLKIVPIASNMIFRLDPKVRGSDVPESESPSVANDELSV
QEKADRMRELSNLYGTKKSIKQAKKLLSLKQEDDPETKKDLDGKMKNVVVNKEALESSNA
QISRNIPTYNASATTPQEAYPLDKIILKGEWGFLEDLYFLLQAESEISANYPAFVRNRIY
KLQDIQDEEEKKKLCCIYSYITHLIKYKDQHSMDGVSSVKGHKIPSMLRQKFSSMFSTTE
SRRLSAEKTDLLISHVLVLALFADEFSSDPSDIARDLRTSPFTLRVHYDNLGCKFIRKNN
LSLVTLPVPLQFPELRQKRRR
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgagaaaattaatggcgggagattctaaatattttgaagaaacccattacgcagaacca
gaagcgaattctcagtctccagcgaagaaaaagaagaagagtgaaaagaagaagaaacga
gttccacctgtgaatacaaaaatccaagtcctcagcaaccatcctgagaagattccacca
ttagttggttatttcccctctgggtatgatcctaacaaggatcccaatgaggaagcggtc
gaggaacaaaattctgtaagggctaaggtttataggcacaagaaaaaaccaaataggatg
cagctggttgtaagtccaacagggttgaatgtggattttgttggtaccaattacttgggt
gaggctactgctggaaaacaacattgcagctatgctctcggtgttcttgataaggcaacc
caaagcttaaagattgtgcctattgcatcaaatatgatatttagattggatcctaaagtt
agaggttcagatgttcctgaaagtgaatccccaagtgtggcgaacgacgagctctctgtg
caggagaaagctgatagaatgagagagctcagcaatctctatggaacgaagaagtcgata
aaacaggcaaagaagctgctttctttgaagcaagaggatgatcctgagaccaagaaggat
ctagatgggaaaatgaaaaatgttgtggtaaacaaagaggcgttggaaagttcgaatgca
caaatttctcgtaatataccgacatataatgcttctgcaacgactccacaagaagcttac
cccctcgacaagattatcctcaagggagaatggggtttcctggaagatctttatttcctt
ttgcaagcagaatctgaaataagtgccaattatccagcctttgtccgcaacagaatttat
aaattgcaagacattcaggatgaggaagagaaaaagaagctctgctgcatatattcatac
atcactcatctaataaagtataaggatcagcattctatggatggcgtttcttctgttaag
ggccataaaattcctagcatgctacgacaaaagttctcatccatgttttcaactacggag
tcgagaagactgtcagcagagaaaaccgatcttctcattagccacgttttggtgctcgcg
ttattcgccgatgaattcagcagcgatccatctgacatagcaagggatctgagaactagt
cctttcactctaagagtccattatgacaatctgggttgcaagtttatacgcaagaacaac
ttgtcattggttacgcttcctgtcccgcttcaatttcccgagttgaggcaaaagagacga
cgataa

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