Cucurbita pepo subsp. pepo (vegetable marrow): 111779397
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Entry
111779397 CDS
T05351
Name
(RefSeq) nuclear pore complex protein NUP54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111779397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111779397
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111779397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
111779397
NCBI-ProteinID:
XP_023515339
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Position
LG01:complement(9856937..9861772)
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AA seq
415 aa
AA seq
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MFGAQQSSSAFGTPQSTPAFGTLRSTPAFGTLRSTPAFGTPQSTPAFGTPQSTPAFGTPA
STPAFGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPLQQQQQQQQSPLF
QQRGATGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNP
KYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQR
LKIQDEVILADAERLRMTQSNVKMLQRHFLADTLPWVQRLKQKEQGLQRRLLRVMRIVEA
LESKGCRVPVMKGEAELAEKLSLITRQFKESGAELSRRVQNLLMITRGQPNGSGAGNSIY
LQGSAKIHEQSLADMQEVLQQQTEAIARLGTVLKRDVRDMEIIMAEDNEMTDDPS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcaacagtcctcctccgccttcggcactccacaatcaactccggccttt
ggcactttgcgatcaactccggcctttggcactttgcgatcaactccggcctttggcact
ccgcagtcaactccggcatttggcactccacaatcgactccagcatttggcacgccggcg
tccactcctgccttcggaactccatcggcatctcccgcatttggaaacctttcaactcct
gccttcggaactccatctacatcgtcttttgccaccggcttcggttcgtctctcttctcc
actccattctcttctcagcctttacaacagcaacagcagcagcagcaatcgccgctgttt
cagcagcgaggcgccacaggattcggtttccagactccgtttgcagcgcctcagtccagt
ccatttccaaatgctcaactgatcactcagatggcgccggtggcaccgcttcctttctgc
ctggctgatcgagatattcaagcaattgttgaggcatacaaggacgacgcaggaaaccct
aagtatgctttcaagcatttgttgttcagtgtaactgatcctcaatatagggcgaagcct
gcaggtgtatcggatacaatgtgggctgaggcaatggcaaaactagaaggcatggaaagt
gcggatagagagcgattgtggccacagcttgttcaaggatttaaggatttatctcagcgc
ttgaagattcaagatgaagtcattctcgctgatgctgagaggctgcggatgacccaaagc
aatgtcaaaatgcttcagaggcactttcttgctgatactctaccatgggttcaaagattg
aaacagaaggagcaaggtcttcaaaggcgtcttttgagagtcatgagaattgtggaggca
ctagaaagtaagggttgccgagtgcctgtaatgaaaggagaggctgaattggcagagaag
ttaagtttgataacgaggcagttcaaagaatctggggcagagctttcaagaagggtgcaa
aatttgcttatgattactcgtggccaaccaaatggctctggtgctggtaattccatctat
cttcaaggatctgcaaaaatacacgaacagagtcttgctgatatgcaggaggttttgcag
cagcagacggaggccattgctagacttggaactgtgttgaagcgagacgttagagacatg
gaaatcataatggctgaagacaacgagatgacagatgatccgagttaa
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