Cucurbita pepo subsp. pepo (vegetable marrow): 111779860
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Entry
111779860 CDS
T05351
Name
(RefSeq) cyclic nucleotide-gated ion channel 17-like
KO
K27629
cyclic nucleotide gated channel 17
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111779860
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111779860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111779860
Ion channels [BR:
cpep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111779860
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
111779860
NCBI-ProteinID:
XP_023515805
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Position
LG18:6342955..6348641
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AA seq
730 aa
AA seq
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MGMELRNYKLVRFYSDHKKHKESAIGSSNNEAMQLEKSSSKYYIPSSTFLMPDNGLGGIK
SKFTETFKTEKSKVFPEDYEPWSKRILDPGSKIVLKWNRVFICSCLLALFVDPLYLYLPA
FNGNGQSQCVRTDWKLRIVVTCFRTVADFFYLLHMIIKFRTAYVAPSSRVFGRGELVMDP
KMIAKRYIRSDFFIDLIATLPLPQIVIWFIIPATRSRLTDHKNNALALIVLLQYIPRLYL
IFPLSSEIIKANGVVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSVDRYTSCWKSFCRKK
EYNTLECNLTFFDCDTFNHNDRDTWANSTLVFEKCGPKGIFKYGIFGQAMSKNVVSSSFI
EKYFYCLWWGLQNLSSYGQNLETTTFMGETLFAVLIAIVGLVLFAHLIGNMQTYLQSLTV
RREEWRLKQRDTEEWMRHRQLPEDLKRRVRRFVQYKWVATQGVDEEVILQSLPADLRRDI
QCHLCLDLVRRVPFFAQMDDQLLDAICERLISSLSTEGTYIVREGDPVTEMLFVIRGRLE
SSTTNGGRSGFFNSITLRPGDFCGEELLSWALLPKSTTNLPSSTRTVRALNEVEAFALRA
EDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRHKKRMMAKDLLMKESFA
LPEEVADGTSQGGEGFSVVSHPSQAKMFLDVALLASRFAANTRRGAQRMKDDLPKLQKPD
EPDFSIEPDR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgggcatggaattgagaaactacaagcttgttaggttttattctgatcacaaaaagcat
aaggaatctgccattggaagcagcaacaatgaagcaatgcaacttgagaagtcatcatca
aaatactatattccgtcgtcgacattcttaatgcctgacaatggactagggggaatcaaa
agtaaattcactgaaacttttaaaactgagaagtctaaggtgtttccggaggactatgaa
ccatggagcaaaagaatactagaccctggtagcaaaattgttttgaaatggaaccgagtg
ttcatatgctcgtgcttattggcactctttgtcgacccgctatatctttacttgcctgct
tttaatgggaatgggcaatcccaatgcgtgaggacagactggaaattgcgaattgttgtg
acttgtttccggactgttgcagattttttctatcttctgcacatgattataaagtttaga
acagcttatgttgctcctagctctcgagtttttgggagaggcgagcttgtgatggatcca
aagatgatagcaaagaggtatattagatctgattttttcatcgatctaattgccaccctg
cctctccctcagattgtcatctggttcatcatacctgcaacaaggagtcgtctaacggat
cataaaaacaatgctcttgcacttattgttctgcttcaatatattccgagattgtatttg
attttcccattaagttcagaaatcatcaaagcaaatggagttgttacaaagacagcttgg
gcaggagctgcttataatcttctactctatatgttggctagccatgttttaggtgctgca
tggtatttgctgtcggttgatagatatacgtcatgctggaaatcattttgtaggaagaaa
gaatacaatacactggaatgcaacctaactttttttgattgcgatacatttaaccataat
gaccgcgatacatgggcaaatagtacacttgtttttgaaaaatgtggcccgaaaggaatt
ttcaagtatggcatttttgggcaagcaatgtcgaagaatgtcgtctcttcaagctttatt
gaaaagtacttctattgtttgtggtggggcttgcaaaacctgagttcatatggacagaat
ttggaaacaaccacttttatgggtgagacactgtttgctgtgctcattgccattgtaggc
cttgtattatttgcccatcttatcggaaacatgcagacgtatctgcaatccctcactgtg
aggcgtgaagaatggagactaaagcaaagagacactgaagagtggatgagacatcgtcaa
ctccctgaagacttgaaacgacgagttcgacgttttgtacaatataagtgggtagcaact
caaggagtggatgaagaagtcatcttgcaaagcttgcctgctgatcttcgacgtgatatt
cagtgccacctatgtctagatcttgtccgacgagttccgttcttcgcacagatggatgat
cagctacttgatgcaatatgtgaacgcctgatctcctccttgagcactgaaggtacttat
attgtacgggagggggacccagtgacagagatgttgtttgtcatacgaggcagattggag
agctctaccacaaatggaggccgctctggtttctttaactccataacattacgtcctgga
gacttttgtggggaggagctactttcttgggctttgcttccaaaatcaaccaccaacttg
ccctcctcaactagaacagtcagagcgctcaacgaagtcgaagcttttgcactccgcgcc
gaagatcttaaatttgtggccaaccaatttagacgtctgcacagtaaaaaattgcagcac
acgttccgcttttactctcaccattggagaacatgggcagcttgctttattcaagctgct
tggcgtcgccataagaaaaggatgatggcaaaagatctgttaatgaaggaatcatttgcg
ttaccagaagaagtggcagatggaactagccaaggaggagaaggattctctgttgtttca
catccatctcaggctaaaatgtttctggatgtagccttactagcttcaaggtttgctgca
aacacacggagaggcgctcagagaatgaaagatgacttgccgaagttacaaaaacccgat
gaacctgacttttccattgagccagatagataa
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