Cucurbita pepo subsp. pepo (vegetable marrow): 111779891
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Entry
111779891 CDS
T05351
Name
(RefSeq) protein PIR isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111779891
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111779891
Factors involved in mRNA localization
Other mRNA localization factors
111779891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
111779891
NCBI-ProteinID:
XP_023515847
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All DBs
Position
LG18:2440615..2480085
Genome browser
AA seq
1285 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDDQPELQGPGVWVSTERGATESPIEYSDVSAYRLSLAEDTKA
LNQLNALIHEGKEMASVLYTYRSCVKALPQLPESMKQSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERRINGPSVTHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSIQWQDSDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQILIV
FAVESLELDFALLYPERHVLLRILPVLVVLATSSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAILKELSIYFQKFAAQARLLTLPAPHELPPREAQEYQRHYLIINHIGAI
RAEHDDFTIRFASSMNQLLLLKSTENPDIEWCKDVKGNMYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPCKDVISLESHETSSFSDYEKVVRHNYSAEERKALVELVSYIKSIGSMMQQCD
TLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKEISRILSDMRTLSADWMANRSKSES
EAQSMQRGEESKVNFFFPRPVAPTATQVHCLQFLIYEVVSGGNLRKPGGLFGNSASEIPI
NDLKQLETFFYKLSFFLHIFDYTATGATLTDLGFLWFREFYLETSRVIQFPIECSLPWML
VDYVLESQNAGLIESALFPLDIYNDSAQHALVTLKQRFLYDEIEAEVDHCFDIFVTKLCD
SIFTHYKSWAAREMLDSSFLFAIDNGEKYSVQPIRFNALLKITRVKLLGRTIDLRSLVAQ
RMNKIFRENLEFLFDRFESQDLCAILELEKLMDVLKVTHELLSKDLLIDSFSLMLNEMQE
NLSLVSFSSRLASQIWSEMQNDFLPNFILCNTTQRFVRLSKVPSVPVQKPSVPHAKPNFY
FGTQDLNSAHQSFARLHSGFFGLTHMFSIARLLGSRSLPWLIRALLDHISNKIAVLEPMI
SGLQEALPRSIGLLPFDGGVAGCMRSINENLNWEAKSELRLEVLHGIKEIGSVLYLISLL
DIVLRELDVTHFMQTAPWLGIIPGVDGQIFHSQDGESPIVSLFKSATSAAVSNPGNPNGM
SYYTMSKQAEAADLLYRSNLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFVDITTSKD
FYRIYSGLQIGYLEESAQSPSNNHELLGDSVAWGGCTIVYLLGQQLQFELFDFSYQVLNI
AEAEDGTFVQTHKNSHYMQGWESLIEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSG
APLHRVKFENTVSAFETLPQKGAVN
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccccgtcgaagaagccattgctgcgttgtccacattctcccttgaggatgac
cagccagagttgcaaggacctggcgtttgggtgtcaactgagagaggcgcaactgagagt
ccgatagagtacagtgatgtttccgcatatcgtttatctctagcagaagacaccaaagct
ctcaatcagttgaatgctcttatccatgaggggaaggagatggcatcggtgctttataca
tatagaagctgtgttaaagcacttccacagttaccggagtctatgaagcaaagtcaagct
gacctatatttggaaacgtatcaagttttggacttggaaatgagtcgtctacgtgagatt
cagagatggcaagcatcagctgcatcgaagcttgctgctgatatgcaacgtttctcgagg
cctgagaggcgcattaatggcccatcagttactcatctctggtcaatgctgaaattgctt
gatgttttagttcaacttgatcatcttaaaaatgctaaggcaagcatacccaacgacttc
tcttggtataaaaggaccttcacgcaagtcagtattcagtggcaagattctgattcaatg
agagaagaattagatgacttacagattttcttaagcacacgatgggccattttattgaat
ctgcatgttgagatgtttcgtgtaaacaatgtagaagacattcttcagatcctcattgtc
tttgctgtggagtccttggagttggattttgcacttctatatccagagaggcatgtgctt
ttacgtattctgcctgttcttgtcgtattagcaacatcatcagagaaggacagcgaatca
ctttataagagggtgaagatcaacagactcattaacatctttaagaatgatcctgtgatt
ccagcatttccagatcttcatctttctcctgcagcaatcttgaaagaattgtcgatatac
ttccaaaaatttgctgcccaagctcgtcttcttactcttccagctccacatgagcttcca
ccacgtgaagcacaagaatatcagagacattaccttatcatcaaccacattggagcaatc
cgtgcagagcacgatgatttcaccattcgatttgcgtcatcaatgaatcagctgctgctg
ttgaaatcaacagagaatccagatattgagtggtgcaaagatgttaaaggaaacatgtat
gacatggttgttgaaggttttcaactcttgagcagatggactgcgcgtatttgggaacaa
tgtgcatggaaattctctcgcccatgcaaagacgttatttctttggaatctcatgaaacc
tcgtcattctcagactatgaaaaggtggtgagacataattatagtgcggaggaaaggaaa
gctcttgttgagctggttagctatataaagagcattgggtcaatgatgcagcagtgtgat
actctggtagctgatgctttgtgggaaacaatacatgctgaggttcaagattttgttcaa
aacacattggcaaccatgttgcgaactacattccggaagaagaaagaaatttcaaggatt
ctttctgatatgcgaaccctgtcagctgattggatggcaaatagaagcaaatctgaatct
gaagcacagtctatgcaaagaggtgaagaaagtaaagtgaacttcttttttccacggcca
gttgcacctacagctactcaggttcattgcttgcaatttctgatttatgaggtggtgtct
ggtggaaaccttaggaagccaggagggctttttgggaatagtgcgtctgagattcccatt
aatgatttgaagcagttggagacctttttctacaagctcagcttctttctgcacatattt
gattataccgcgactggtgcaacattaactgatcttggattcttatggtttagagagttt
tatttagagacttcacgggttattcagtttcctattgaatgctcccttccctggatgctg
gtggattatgtcctcgagtctcagaatgcaggccttattgagagtgctttatttccactt
gacatttacaatgattcagctcaacatgccttggttactttgaaacaacgttttctctat
gacgaaattgaagctgaggtcgatcattgttttgatatatttgtcacaaagctatgcgat
tcaatctttacacattacaagagttgggccgcgagagagatgctcgattcatctttctta
tttgccatagacaatggagaaaaatattctgtccagcctataaggtttaacgcccttcta
aagatcactagagtaaagttacttggaaggactattgatttaagaagcttggttgcccaa
cgaatgaacaaaatttttcgagagaaccttgaattcttatttgatcggtttgagtctcaa
gatctttgtgccattttggaattggaaaagctgatggatgtcctgaaagtgacccacgaa
ttgctatccaaagatcttttgatagactcatttagtctcatgctaaatgagatgcaagaa
aatctatctcttgtatcattctctagccgattggcttctcagatttggtcagagatgcaa
aatgacttcttaccgaactttatcctatgcaatactactcagcgatttgtaagattatcc
aaagttccatctgttccggttcaaaaaccatcagttcctcatgccaagcctaacttctac
tttggtactcaagacttgaattctgctcatcaaagttttgcacggttgcatagtggattc
tttgggttgactcacatgttttccattgcgagacttcttggatctagatccttaccatgg
cttattcgagcacttctggatcatatatcaaataagattgctgtacttgaaccaatgata
tcaggattgcaagaagcgttgccaagatctataggattactaccatttgatggaggtgta
gcaggttgcatgagatcgatcaatgaaaatctaaactgggaagcaaagtcagagctcagg
ttggaggtcctgcatggaataaaggagattggaagtgtgttatatttaattagccttctt
gatattgtgctgagagaattagacgtcacgcatttcatgcagacagcaccttggttaggg
ataattccaggtgttgatgggcaaatatttcattctcaagatggagagagccctattgtt
agcctattcaagtcggcaaccagtgcagctgtttcaaatcctggaaaccctaatggaatg
tcatattataccatgtcaaaacaggctgaagcagcagatcttctgtacagatctaacttg
aatactggaagcgttctagaatatgcacttgcttttacaagtgctgctctggataaatac
tgtagcaaatggagtgctgctcccaagactggattcgttgacatcactacttcaaaagat
ttctataggatatatagtggactccaaataggctacctggaagagtctgctcaatcacct
tcaaacaaccatgaactgcttggtgattctgtagcttggggtggttgcacaatagtctac
ctgctcgggcaacagctacaatttgagctgtttgatttttcgtaccaggttctgaatatt
gctgaggcagaggatggaacatttgtgcaaactcataaaaattcccattatatgcagggc
tgggaatccttaatagaagccatgaagaaggccagaagattgaacaaccatgtattctca
atgctgaaggcacgttgtcctcttgaagacaagacggcatgtgccatcaaacagagtgga
gctcctcttcatcgtgttaaatttgagaacactgtctctgcttttgaaacactgccccag
aaaggtgctgtcaactaa
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