Cucurbita pepo subsp. pepo (vegetable marrow): 111780038
Help
Entry
111780038 CDS
T05351
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111780038
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpep01007
]
111780038
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111780038
03029 Mitochondrial biogenesis [BR:
cpep03029
]
111780038
Enzymes [BR:
cpep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
111780038
Amino acid related enzymes [BR:
cpep01007
]
Aminoacyl-tRNA synthetase
Class I (G)
111780038
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111780038
Prokaryotic type
Other AARSs
111780038
Mitochondrial biogenesis [BR:
cpep03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
111780038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
111780038
NCBI-ProteinID:
XP_023516065
LinkDB
All DBs
Position
LG18:complement(5172548..5179644)
Genome browser
AA seq
644 aa
AA seq
DB search
MFAPFLSPAPPSPLLSFNRFSHISPPSCIPAADLLRVASRRLISATKTTQSVSTMATEEE
NVGNMKRQLAKIFDVSLRATVPEEMDVEPLVAACAGKFGDYQCNNAMGLWSKIKGKGSQF
KGPPSVGQAIMKNLPPSEIIESCSVAGPGFVNVLISKNWIAKSIQKMLIDGIETWSPRLP
IKRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGDWGTQFGMLIE
FLFERFPNWEEVTETAIGDLQTFYKASKQRFDSDPAFKEKAQQAVVLLQGGEAKYRKAWA
QICEISRNEFNRVYERLGVQLEEKGESFYNPYIPNVIKELTDKGLVEESQGARVIFIDGI
NIPLIVVKSDGGFNYASTDLAAIWYRLNEEKAEWIIYVTDIGQQQHFDMVFRACKRAGWL
PLEDNKHPKATHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAKSRSKAALIEREKAAEW
TEAELEQIAEAVGYGAVKYADLKNNRLTNYTFNFDQMLNDKGNTAVYLLYAHARICSIIR
KSGKDIEELKKTGTIVLEHEDERVLGLHLLQFSEVVEEACTNLLPNVLCEYLYNLSEIFT
KKFYSNCQVVGSPQETSRLLLCEATGTVMRKCFYLLGIVPVYKI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctcccttcctatcgccggctccgccttctccattgctctctttcaatcgattt
tctcacatttctcctccctcttgcattcctgctgctgacttactccgggtggcgtctagg
cgactcatttctgctacgaagacgacacaatcggtttccacaatggcaactgaggaagaa
aacgtcggtaatatgaagcgacaattagctaaaatattcgacgtatcccttagagcgacg
gtccctgaggagatggatgttgagcctttggttgctgcttgtgctggaaaatttggcgac
tatcagtgcaataatgctatgggcctttggtctaaaataaaaggaaaaggaagtcagttc
aaaggccctccttccgttggacaggccattatgaaaaatcttcctccatctgaaatcata
gaatcatgttctgtggcaggccccggtttcgtgaatgttctaatatccaaaaattggatt
gctaagagcatacaaaaaatgctaattgatggtattgaaacttggtcaccgcggcttcca
attaaaagagcagtagttgatttctcctcgcctaatatagcaaaagaaatgcatgttggc
cacttaagatctacgatcattggagacactctagccaggatgcttgaattttcaaacgtt
gatgttcttcggagaaaccatgttggtgactggggaacacagtttggtatgttgatcgaa
ttcctttttgaaagatttcccaactgggaagaagttactgaaacagctattggagatctg
cagacattctataaggcgtcaaagcagaggtttgatagtgatcctgcatttaaggagaag
gcacaacaggcagtggttcttcttcagggtggtgaagctaaatatcgcaaggcttgggca
caaatatgtgaaatcagcaggaatgaatttaatagggtgtacgaacgacttggagttcaa
ttagaggagaagggagagagcttttacaacccatacattcctaatgtcataaaagaactg
actgataagggcttggtggaagaaagtcagggtgctcgtgtaatctttattgatggaata
aatattcctctaattgttgtcaagagtgatggtggtttcaattatgcttcaactgatctt
gcagccatctggtatcgccttaatgaagaaaaagctgaatggattatatatgtcactgat
attgggcagcagcagcactttgacatggttttccgggcttgtaaacgtgctggctggctt
ccacttgaggataataagcatcctaaagcaacccatgttggttttggtttggttcttggt
gaagatggcaagcgttttcgtactcgaaatactgaagtggttcgtttagttgatttgctt
gatgaagccaagagccgcagtaaagctgcacttattgagagggagaaagctgcagaatgg
actgaagcagaacttgaacaaattgctgaagctgttggttatggtgctgttaaatatgct
gacctcaagaacaacaggttgaccaactatacgttcaatttcgatcagatgctcaatgat
aagggcaacactgctgtgtatttgctgtatgcccatgctcgtatctgttcaatcatcagg
aaatctggtaaagacatagaggagttaaaaaaaacgggaacaattgtgttggagcacgag
gacgagcgtgttttggggcttcatttgttacaattttccgaggtggtcgaggaagcttgc
accaatctgttgccgaatgtgttgtgtgaatacttgtacaacttatcggaaatatttacg
aaaaaattctactccaactgccaggtcgttgggtcgccccaagaaaccagcagactccta
ctttgtgaagctacaggcacagtgatgaggaaatgcttctatctcctcggaatagtacct
gtctacaaaatataa
DBGET
integrated database retrieval system
