KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111780102
Entry
111780102         CDS       T05351                                 
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
  KO
K14396  polyadenylate-binding protein 2
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111780102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111780102
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111780102
SSDB
Motif
Pfam: RRM_1 CC149 MSP RRM_7 RBD_DEAH11 ABC_tran_CTD
Other DBs
NCBI-GeneID: 111780102
NCBI-ProteinID: XP_023516160
LinkDB
Position
LG01:complement(1889914..1894258)
AA seq 234 aa
MEHNFNYDEHEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNANSKDLEDMK
RRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDARSVYVGNVDYACTP
EEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSA
KRTNVPGMKQYRGRRPNPYGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY
NT seq 705 nt   +upstreamnt  +downstreamnt
atggagcataatttcaactacgacgagcacgagcacgaacacgaagtctatggcggcgat
attcccgacgacgccgagatggatgctgacctcgatatgtcctctggtagggctgacgaa
gaaggctacgacgatgccgagcctactaacgccaactcgaaggacttggaggacatgaag
aggaggcttaaagagatcgaggaggaggccggtgctcttcgggaaatgcaggccaaggtt
gagaaagagatgggcgctgttcaagaagattcatccagtacctctgcaactcaggctgaa
aaggaggaagtagatgctcgatcggtatacgttggtaatgttgactatgcatgcactcct
gaagaggttcaacagcattttcaatcatgtggaacagtgaacagagtcacgattttgact
gacaaattcggtcaccccaaaggatttgcttatgttgagtttgtggaagttgatgctgta
cagaacgctttgctgttgaatgagtcagagttgcatggtcgccaactaaaggtctccgcc
aagaggacaaatgtccctggcatgaagcaataccgaggaaggcgaccgaacccttatggc
tttcgaggtcgccgccctttcatggcagatgcacctttttatccttcgtatggttatgga
agggttccgaggttcaggcggccgatgcggtacagaccatactag

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