KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111780130
Entry
111780130         CDS       T05351                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 34-like isoform X1
  KO
K22415  zinc finger CCCH domain-containing protein 11
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111780130
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111780130
SSDB
Motif
Pfam: zf-CCCH_3 zf-CCCH_2 Torus
Other DBs
NCBI-GeneID: 111780130
NCBI-ProteinID: XP_023516193
LinkDB
Position
LG18:5675650..5679736
AA seq 553 aa
MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
PPMDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF
PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD
VVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH
SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS
NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFK
GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE
ELVKEMNSNHILL
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgggggaagatttgcgtaaacgtaacactgattgcgtctatttcttggcttcacctctt
acctgcaagaagggttttgattgcgagtatcggcacagcgagattgctaggctgaaccct
agagattgttactactggctggcgggaaactgcttgaatgcagcctgtggttttcggcat
ccgccaatggatagtcctgctggaacagtgttagaatcttctcaatgttctgtacctgtg
aacaagacgatcattccctgttatttttatttcaatggctgctgcagtaaaggtgataca
tgctcatttttgcatgccaatgatatttctcttgctacaagatctacaaagacagtattt
cctagtggcaacgcgtcgtcctctgaagataaaacagcttcaggaaacaaaaaaggacta
gcctctaccgacgcagatgcatttcttcatccatcgaagaacgtagctggtccgaaaatt
gatgttacatttcaatgctcgagtctcggtcaaccttctgaaaatgtttcacatcaaagt
gcctctgcgaagatcttgttgcttgagtgtgaaaaagtggctgttgatgagcttgtctcc
tcgtctccagctgtgggatctaatgacagtacatctcatgtacatgctgttgcagatcag
agttatgaggagccgatgacggacagtactgaggaaggcaacctatcccctggctttgac
gtcgtcgtcggtgatgggtcggggaatttggctagccacgatgagccagagtacatcctg
tcaacgaatctggaacaaagagaactggatactggattgtgcagggaaaattttgaagac
catattgcctatgagccaatgcattctgatttagaacttctttatgaacatgagatgcac
tcatacaaccacttagagaccgaacctgttcttttcaatgacagaaacatcatcagctgt
ccgagagggaaactcatcaagtccatgttttctcaaaagaaaaggctcacgctcgtgaat
ctagattcggaggaatggaaccatgccgaccttcgaagctatctgcagagagacagcgtt
tctggtaaccgttcgattgttagtttatcaaggagaagaaatcgattgtcgtgtcgaatg
agtggaaactttgtgaaacctcggaagcctggtttgtatcaaccaccccttggaagaaga
ctagcattacaggtcgggaagatttctagaggatcacctccagaaaacataaccttttca
aatggttttagtcaatatggatcatttagacactcaagacaacacagaccctgcggtcac
tacgacgaatacgctccgaccagaccacaacaaacattgttaaacatgtcaagaaaatcc
atctcgagggaacctgtcgtaagggatcatggattcaatccgaagtcagttccattcaaa
ggaccgaaaaccctttcgcagatcaaagaagagaagcgaaaagtagaagaaaatggaggg
ttctcaatcgaaaaacgtcgttccatcggagctgcatcatcttcaaccaactttagagga
ccaaaacctttgagtgatatcctgaaagacaaaaggaaggtggaggaggaggaggaggag
gagctggtgaaggaaatgaatagcaaccatatattgctttag

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