Cucurbita pepo subsp. pepo (vegetable marrow): 111780169
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Entry
111780169 CDS
T05351
Name
(RefSeq) uncharacterized protein LOC111780169 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111780169
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111780169
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
111780169
NCBI-ProteinID:
XP_023516261
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Position
LG18:complement(3954383..3962512)
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AA seq
596 aa
AA seq
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MERSDEEHRIAPIGERSLRQDNLKEPQLSPKGGRIASTNPSPNAVIIGPSRDAIEKTMDA
GTSISSVHPLNVHASHEPNVQYGGYGGSSAGSWDAYSQYVNADSFPVVSPVMYNDNPSIV
FHSGYGFNPDMAYGQYSPVATPMPSVMLDGQVYPPQQVPFSPSYYTQQAAPCLPHGSSAV
PVSPTEMISPESSTFDNMLYGPGTGFLLNFGSFGGGNLGSGSLTSPAAYPQPMGMLGSND
QNVGQVSLQQGHMHGFGLVSNAFDARYPLSNSYQGSNFGGASISYPVVSDRSRPVLGKDR
GRDRDRDSISVFNDPYGIFSDRNRGPRALKVKGKGELSAASGASKNDLSTSLISPDSYNR
PNFATDYETAKFFVIKSFSEDNVHRSIKYKVWASTPHGNKKLDAAYREAKEMQGNCPVFL
FFSVNASGQFCGVAEMAGPVDFEENVDYWQQDRWSGQFPVKWHIIKDVPNIRFRHVLLEN
NDSKPVTHSRDSQEVPLKQGIEMLKIFKDHDPRTSIIDDFDFYDERERILKERKTRQQLF
ATANSLNPLGDGSINPISDQFAHALRLDDNKKEKPEMEKGATSRIDASVSLDDSVK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaacgttccgacgaggagcatcgaatcgctcctattggagaaagatctcttaggcaa
gataacctgaaagagccgcaactctcacctaaaggtggaagaattgcttcaacaaatcct
tctccaaatgcagtaattattggaccttcaagggatgccatagaaaagactatggatgca
ggaacaagtattagcagtgttcacccgttgaatgtacatgcttcacatgaaccaaatgta
caatatggtgggtatggtggaagcagtgctggttcttgggatgcttattcacaatatgta
aatgctgacagttttcctgttgtatcaccagttatgtacaatgacaatccatctattgtc
ttccattctggttatggctttaatccagatatggcatatggacaatattcaccggttgct
acccctatgccttctgttatgttagatggacaagtatatcctcctcaacaagtcccattc
tccccatcatactacacacaacaagctgcaccatgtttacctcatggatcttctgcagtt
cccgtttcaccaacagagatgatatcacctgagagtagtacatttgacaacatgctttat
gggccaggaacaggttttttgctaaattttgggtcctttggtggtggaaatctgggttca
ggttctttaacatctccggcagcttatccacaaccaatgggaatgcttggctcaaatgat
cagaatgtcgggcaggtttccttacaacagggacatatgcatggatttggattggtttca
aatgcctttgatgctcggtacccattaagcaattcttatcagggttctaacttcggcggt
gcatcaatttcttatccagttgtaagtgaccgaagccgacctgtccttgggaaggacaga
ggaagagacagggaccgggactcaatttcagtttttaatgatccgtacggtatctttagt
gaccgtaatcgggggccaagagctttgaaggtcaagggaaaaggggaactaagtgctgca
tctggtgcaagcaaaaacgatttatcaacttcattaattagtcctgattcctacaatcga
ccaaactttgctacagattatgagactgccaagtttttcgttattaagtcatttagtgaa
gataatgttcacagaagtatcaagtacaaagtttgggctagtactccacatggtaacaag
aaactggatgctgcttaccgtgaggcaaaagagatgcaaggaaattgtccagtttttctc
tttttctccgttaatgccagtggtcaattttgtggtgtagctgaaatggctggacctgtt
gactttgaggaaaatgtagattactggcagcaagataggtggagtggacaatttcctgtt
aagtggcatatcatcaaagatgttcctaatattagatttcggcatgttttacttgaaaat
aatgacagcaaacctgttacacacagcagggattctcaggaggtgccgctgaaacaaggt
attgagatgttgaaaattttcaaggaccatgatccacgaacatctattatagatgatttt
gatttctatgatgagcgggagaggattttgaaagaaaggaaaacaagacaacagctattt
gcaactgcaaattctctaaatccactaggtgatggttccattaacccaatttctgatcag
tttgctcatgccttacgactcgatgataataagaaagaaaaaccagaaatggaaaagggt
gcaacatctagaatagatgcctcagtttcgcttgatgattcggtaaaataa
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