Cucurbita pepo subsp. pepo (vegetable marrow): 111780255
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Entry
111780255 CDS
T05351
Name
(RefSeq) RNA pseudouridine synthase 7-like
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111780255
Enzymes [BR:
cpep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
111780255
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111780255
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF4729
Motif
Other DBs
NCBI-GeneID:
111780255
NCBI-ProteinID:
XP_023516372
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Position
LG18:8184368..8188609
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AA seq
391 aa
AA seq
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MASVEQLNNDEQKEKEEESMGVGEIIWQTPANPPQRSDYIFHNGRRHVRPYYFEFIAHVK
NRWAGKTIVDLFAEEFKGRPYEYFVDAVKCGRIQVDGEMVPVSYIVKSSQKMSHFLHRHE
PPVMAWNVKILKEEAEVLAVCKPASVPVHPCGQYRKNTVLGILQAEHGLAPLFPIHRLDR
LVSGLLILARNASKADLFRQQIESGLVKKQYLAKVVGVFPEEEQVVDVNINYNAREGKST
AEDTPTKGKAAQTKFTRICSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDVLYLTKE
TTGRSVQKTTADGAAAISACSRAPDIQEDCVNARNEKSNEDFRIDPMCTNCPNLAPKGYD
REEEGLWLHCVQYSGPGWIYECPYPEWGSLK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgtagaacagctgaataatgacgagcaaaaggaaaaggaagaagaaagcatg
ggagtaggagagatcatatggcaaacccctgccaaccccccacaacgaagcgattatata
tttcacaatgggaggcggcacgtcagaccttactacttcgagttcattgctcacgttaag
aatcgatgggccggcaaaaccatcgtcgacttgtttgctgaagagttcaaaggccgacct
tacgagtattttgttgatgcagtcaaatgtggtcgcatacaagtggatggggagatggtg
cctgtatcatatatagttaaatcatctcaaaagatgagtcatttcctgcacaggcatgaa
cccccggtaatggcttggaacgtgaaaattctcaaagaagaagcagaagtgctggcggtt
tgcaagcctgcatctgttccggttcatccatgtggtcaatataggaagaacacagttctc
ggtatacttcaggcagagcatggtttggcacctctatttcctatacatcgactagaccgt
cttgtctctggacttcttatccttgctagaaacgcatccaaagctgaccttttcagacaa
cagattgagtctgggctggtgaagaaacagtatcttgcgaaggtagtgggtgtatttcca
gaagaagagcaagtggttgatgttaacataaattacaatgctcgagagggaaaaagcaca
gcggaggatactccaacgaaggggaaggccgctcaaacaaagtttacccgcatatgttcc
gatggagtccatagcattgttttatgcgaaccaatcactggccgaactcatcaaatccgt
gtgcatttgcagtatacagggtatcctatagccaacgatgtactgtaccttacgaaagaa
acgactggtcgttccgtgcaaaaaacaactgcagatggggctgctgcaatatcagcctgt
tctcgggcacctgatattcaagaagattgtgttaatgcacgcaatgaaaagtcaaatgaa
gattttagaattgatcccatgtgtacaaactgtccaaatttggctccaaagggatacgac
cgggaagaagagggcttgtggctacattgtgttcagtactcgggaccaggttggatctac
gaatgcccatatccagaatggggttcacttaaatag
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