Cucurbita pepo subsp. pepo (vegetable marrow): 111780458
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Entry
111780458 CDS
T05351
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00270
Cysteine and methionine metabolism
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
111780458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111780458
03032 DNA replication proteins [BR:
cpep03032
]
111780458
03036 Chromosome and associated proteins [BR:
cpep03036
]
111780458
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
cpep02048
]
111780458
Enzymes [BR:
cpep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
111780458
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
111780458
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
111780458
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111780458
Prokaryotic defense system [BR:
cpep02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
111780458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
111780458
NCBI-ProteinID:
XP_023516647
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Position
LG18:complement(2902794..2916877)
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AA seq
857 aa
AA seq
DB search
MSSKRRSKSAAPISPKPDADASSPNKKLKSELNGDGTPISHSPAKLGSQSTKVKAELSGD
EDYDSARFVEPRIPDSEARERWPLRYRGKKKQQVVGEKNSRDDAEEVIQAHRHYSQAEVD
NTIYNLFDDAHVKAEDGEEDYICRIVEMFEAVDGQLYFTAQWYYRAKDTVVKDHAHLIND
KRVFFSEVRDDNPLDCLVKKLNIARIPLSMAMDKKKTRLPACDFYCDMLYLLPYSSFVKL
PESEKRVGSETSSTISSEGDTNGPCEVTSIGDVTQAQQCCKPDVALLDLYSGCGAMSTGL
CLGGNLSGVNLVTKWAVDLNQYACESLKFNHPETEVRNEMAEDFLSLLKEWEVLCKYFSL
IKSEGPQQKYVDLFANEEEEEDEGEDEKTEDDEEVFEVEKILAICYGDPNGTKKRGLFLK
VSWKGYGSDEDTWEPIEGLSNCKEKLKDFVTNGYKSKSLPLPGDVDVICGGPPCQGISGF
NRFRNIENPLEDEKNKQLVVFMDLVEYLRPKYVLMENVVDIVRFANGYLGRYALGRLISM
NYQVRMGMIAAGAYGLPQFRRRMFMWGAQPTEKLPQYPLPTHDVVVRGGVPTEFEMNAVA
FDDGHNGVELEKKLLLEDAISDLPAVGNDERRDEMPYDKPPLTEFQRLIRLPREERFDCS
TKSKPAMHELYDHRPLELNTDDYQRVCQIPKRKGANFRDLPGVRVRPDNKVEWDPDIQRV
YLKSGKPLVPDYAMTFVKGSSPKPFGRLWWDETVPTVVTRAEPHNQAILHPEQERVLTIR
ENARLQGFPDYYKLFGPVKERYIQVGNAVAVPVARALGYSLGMAFQGLAADEPVFSLPKK
LPNIVKQQSFASSEEVA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcgacgctccaaatccgccgctcccatctcccctaagcccgacgccgat
gcttcttcccccaacaagaagctcaaatccgagctcaatggagatggaactcccatttca
cattcccccgccaagctgggttctcagagcacgaaggtgaaggcggaattgagcggcgac
gaggactatgattcggctaggttcgtggagccccgcattccggatagcgaggcgagagaa
cggtggcctctgcggtatcggggaaagaagaagcagcaggtagttggggagaaaaattca
agggatgacgctgaggaggtaattcaggctcaccgtcattactcacaggctgaagttgac
aataccatttacaatctctttgatgatgcccatgttaaggctgaagatggggaggaagat
tatatatgcagaattgttgaaatgttcgaggctgtcgacgggcaactatatttcactgct
caatggtattatagagctaaagatactgttgtgaaagatcatgctcatctcatcaatgac
aagcgtgtattcttttcagaagttcgggatgataatccattggattgtcttgttaagaag
ctaaatatagctagaattcctctaagtatggccatggataagaagaaaacccgtcttcca
gcttgtgacttctactgtgacatgttatacttgttgccatattcctcattcgttaaactg
cctgaaagtgagaaaagggttggcagtgagacgtcgtcgacaatttcctccgagggtgat
accaatggaccatgtgaagtgacctcaattggggatgtcactcaagcacagcagtgttgt
aagcctgatgttgcacttcttgatttatattcaggatgtggtgccatgtcaactggatta
tgtttaggcggcaatttgtctggggtgaacctagtcacaaaatgggcagttgatttaaat
caatatgcttgtgaaagtctaaagttcaatcacccagagacagaggttagaaatgaaatg
gcagaagattttttatcgttgttaaaagagtgggaagtgctttgcaaatatttttctttg
ataaaaagtgaagggccacaacaaaagtacgtagatctttttgctaatgaagaggaagag
gaagatgaaggggaagatgaaaagactgaagatgatgaagaggtgtttgaagtggaaaaa
atacttgcaatatgttacggtgatcctaatggaactaaaaagcgtggattgtttcttaag
gtttcctggaagggttatggctctgatgaagacacatgggagccaattgagggattgagc
aactgcaaggaaaagttgaaagattttgtgacaaatggttacaaatcaaagagcttacct
ttgcctggtgatgtggatgttatctgcggagggcctccttgccagggtattagtggtttc
aatcgcttcaggaacatagaaaatccactggaagatgagaaaaacaaacagcttgttgtc
ttcatggacttagtggagtatcttaggcctaaatatgttttgatggagaatgtagtagat
attgtaaggtttgccaatggatatctgggacggtatgcgcttggtcgtttaatatcaatg
aattatcaagttcgtatgggaatgatagcagcaggtgcatatggacttccacagtttcgt
aggcgaatgtttatgtggggtgcccaaccaacagagaagcttccacagtatcctcttcca
actcatgatgttgtagtgaggggtggagttcctactgaatttgagatgaatgctgttgct
tttgatgatggacataatggcgttgagttggaaaaaaagcttcttttggaagatgcaatt
tctgatcttcctgctgttggaaatgacgagcgtcgagatgaaatgccttatgataaacct
cccctgactgagtttcagcgtttaattagattgcctagggaagaaaggtttgattgttct
acaaagtctaagccagcaatgcacgaattatatgatcatcggccacttgaactaaataca
gatgactatcaacgtgtttgtcagatcccaaagagaaagggggcaaacttcagagattta
cccggcgttcgtgttcgccctgataataaagttgaatgggatcctgatattcagagagtg
tatttgaaatctggaaagcctttggttcctgattatgccatgacttttgtaaagggatca
tcaccaaagccatttgggcggttatggtgggacgagacagtgcctacagttgttactcgg
gcagagcctcacaaccaggcaattttgcatccagagcaagaaagagtattgactattcgt
gaaaatgcaagacttcaaggctttccagattattacaagctctttgggcctgtaaaagaa
aggtacattcaagtaggaaatgcagtagcagtcccggttgctcgagcgttaggatattcg
ttaggcatggcgtttcaaggtcttgctgcagatgagcctgtatttagtctacccaaaaag
ctccccaacattgtcaaacaacagtcttttgcatcctccgaggaagttgcttga
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