Cucurbita pepo subsp. pepo (vegetable marrow): 111780542
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Entry
111780542 CDS
T05351
Name
(RefSeq) actin-related protein 4
KO
K11340
actin-like protein 6A
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111780542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111780542
03036 Chromosome and associated proteins [BR:
cpep03036
]
111780542
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111780542
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111780542
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
111780542
Chromatin remodeling factors
BAF complex
111780542
PBAF complex
111780542
GBAF(ncBAF) complex
111780542
SRCAP complex
111780542
INO80 complex
111780542
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
111780542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
Ppx-GppA
Motif
Other DBs
NCBI-GeneID:
111780542
NCBI-ProteinID:
XP_023516735
LinkDB
All DBs
Position
LG18:complement(7247773..7255356)
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AA seq
445 aa
AA seq
DB search
MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGCIDEMDVDDTTSTEKNSGSAGE
SKSNAKSLDTDKGKGKRKLYVGSQALGFRRDNMEVLSPIKDGVVVDWDMVDSIWDHAFRE
CLLIDAQEHPMLLAEPSSNSQQQRERTAEIMFEKYKVPALFLAKNAVLTSFASGRATSLV
VDSGGGSTTVAPVHDGYVLQKAVVSSPVGGEYLTDCLLKSLESKGIKIMPRYSFKRKEIR
PGEFQIVELDFPNTTESYKLYSQRVIASDIKECVCRAPDTPYDESAYSNIPMTPYELPDG
QTIEIGADRFKIPDVLFNPSLAQTIPGVESFTETGRSVQGLPHMVIESINKCDVDIRREL
FSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLG
SFQQMWFSKSEYEEHGASYIQRKCP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtggtgatgaggtatccgctatagttattgaccttggttctcacacttgcaaa
gctggttatgccggagaagatgctcccaaggctgttttcccctccgttgttggatgtatt
gatgaaatggatgttgatgacaccacaagtactgaaaagaattctggatctgctggagaa
tctaaaagtaatgctaaaagtctcgatactgacaaaggaaagggaaaacgcaaactatac
gtcggttctcaagctttagggttccgccgtgataatatggaggtactttcacctataaag
gatggagttgttgttgactgggatatggtcgatagcatatgggatcatgcattcagggaa
tgtctgctgattgatgctcaagaacatcccatgctacttgctgaaccatcttctaattca
caacaacagagagaaaggacggctgagattatgttcgagaagtacaaagttcctgcattg
tttttggcaaaaaatgctgttctcacgtcatttgcatcaggtcgtgctacatcacttgtt
gttgacagtggtggtggatcaacaactgttgccccagtacatgatggctatgttctacaa
aaggctgttgtatcttctcctgttggtggagaatatctcactgattgtttgttaaaaagt
ttggagagcaaaggtatcaagataatgccaagatactctttcaagagaaaggaaatacga
ccaggagaatttcagattgtggaacttgatttccctaatacaactgaaagttacaaatta
tactcacagagggtaattgctagtgatattaaagaatgcgtatgtcgagcaccagatact
ccttatgatgaaagtgcatattcaaatatcccaatgacgccatatgaacttcctgatggc
cagacaattgaaattggggctgatagattcaagattcccgatgttctgtttaacccttcg
ttggcacagactattcctggggtggaaagtttcaccgagacaggtcgctcagttcaggga
ttgccacatatggtaatcgagagtataaataagtgtgatgtggatattcgcagagaactg
tttagtagtatactgcttgctggtggaacagcttcaatgcaacagctcaaagaacgactt
gagaaagatttgttagaggagtctcctcaagctgctagggttaaagtattggcgagtgga
aatgcaactgaaagaagattcagcgtctggataggagggagtatattggcctctcttggt
tcatttcagcaaatgtggttctccaaatccgagtacgaagaacatggggcttcctatatt
caaagaaaatgcccgtag
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