Cucurbita pepo subsp. pepo (vegetable marrow): 111780557
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Entry
111780557 CDS
T05351
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase Pin1
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111780557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111780557
03110 Chaperones and folding catalysts [BR:
cpep03110
]
111780557
Enzymes [BR:
cpep01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
111780557
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111780557
Chaperones and folding catalysts [BR:
cpep03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
111780557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
Rotamase_2
X8
Motif
Other DBs
NCBI-GeneID:
111780557
NCBI-ProteinID:
XP_023516756
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All DBs
Position
LG01:4034759..4037076
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AA seq
122 aa
AA seq
DB search
MSSSAAAGQVRASHILIKHQGSRRPASWKDPEGRIIKNTTRDSAVSQLTVIRDDIISGKS
KFEDVASRISDCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEVSDIVDTDSGVHIIKR
TA
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcggcggccgcaggtcaggttagggcatcgcacatactcataaagcaccaa
ggttctcgacggcctgcttcgtggaaggatccggaaggccgaattatcaagaacaccact
cgcgacagcgccgtctctcagcttactgtcattcgagacgacatcatttccggcaagtcc
aagtttgaggacgttgcctctcgcatctctgactgcagctctgccaagcgtggcggcgat
ctaggtccttttgggcgtggccagatgcagaagccttttgaagaagcaacatttgccctc
aaggttggagaggtaagcgacattgtggacactgacagtggagttcacatcatcaagcgg
actgcttaa
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