Cucurbita pepo subsp. pepo (vegetable marrow): 111780563
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Entry
111780563 CDS
T05351
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111780563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111780563
Membrane trafficking [BR:
cpep04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
111780563
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
AcrIIA4
DUF3502
Motif
Other DBs
NCBI-GeneID:
111780563
NCBI-ProteinID:
XP_023516758
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Position
LG18:complement(6082596..6085226)
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AA seq
199 aa
AA seq
DB search
MKITALLVLKCHPEGSDPIILANAADVSHFGYFQRPSVREFICFVGRTVAKRTPPDQRQS
VQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVMDEYQKNFGETWRTAQADNFQP
WPYLTEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLERGEKLDSLVEKSSDLSA
ASQMFYKQAKKTNQCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcactgcgttgctggtcttgaaatgccacccagaaggatctgatccgattata
ttggccaacgccgctgatgtgagtcatttcggttactttcagaggcccagcgttagggag
ttcatctgcttcgttggtcggaccgtcgctaagcgtacccctcctgaccagcgtcaatct
gttcagcacgaagagtataaggtgcatagttacaatagaaatggtctttgtgctttggga
tttatggatgaccactacccggttcgaagtgcattctctctgcttaaccaggttatggac
gagtaccaaaaaaattttggtgaaacatggagaactgcacaagcagataactttcaacca
tggccctatctgactgaagctttaaccaaattccaggaccctgcagaggctgataaattg
ttgaaaatacagcgggagttggacgaaaccaaaattattcttcataagacgattgacagc
gtgcttgaacgtggtgaaaagttggacagtttggtcgagaagagctctgatctcagtgca
gcatcccagatgttctacaaacaagctaaaaagaccaaccagtgttgtaccatactgtaa
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