Cucurbita pepo subsp. pepo (vegetable marrow): 111780978
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Entry
111780978 CDS
T05351
Name
(RefSeq) autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111780978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111780978
03029 Mitochondrial biogenesis [BR:
cpep03029
]
111780978
Membrane trafficking [BR:
cpep04131
]
Autophagy
Autophagosome formation proteins
ULK complex
111780978
Atg1 complex
111780978
Mitochondrial biogenesis [BR:
cpep03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111780978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
111780978
NCBI-ProteinID:
XP_023517129
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Position
LG19:complement(4595496..4599230)
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AA seq
620 aa
AA seq
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MNSNSSHNTHSETAKVEQILTEFFPKTLQIILESRSPCSISSRNFSGEQVLSSPSSSSSS
SSSMRPRDKWFNLALRECSATLENIDLWRQSYHEPMVIDVVLVQRQFGLDSVDVSPRKDL
VRNLSMKEFGCQSMSEKVVERWMVHYESRKNRDSNSGSRRSSNSTAHTYKKTILLLRSLY
ALLRLLPAHKVFQDISSSSQIHPFTLAHRVSSFVEPFSRREEAEMQHFVFTPVDTSCGRL
CLSVLYRSSLSEITSEPSTPMSPQVIPEYVGSPLADPLKRFPTLPVTIATSHGSSSSLPF
SRRHSWSYDQCRPSPPISFSPSPTNSESHATISNPAFCRLPPSSLPSQMVMGHKDNMNYD
EYYPSLVFSPSPPIGIPVKRLPNGRLQSESAPQSAPTAKLPHSPALLSRPNLPPSPPLKA
FGPGIPRINRDVGPLQAGSAFGKSSSFGRDESRRISGWRVSSNNSPISRSPSTSFPDDLD
DPEFPCPFDDDNEMTDGGSRPESFDPKGSSNLCDMLEPSGFFPIRKSQDAAVGALVRMLQ
KAPPLRQDFTNSSPNLSRPPTPGSSSSRNIQQQGTQICETIAPSKGRYAASSSITASKTT
GDALEELESYREMKNLLLRQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaattccaattcttctcacaatactcattccgaaactgccaaagtagagcaaatttta
actgaattcttccctaaaaccttacaaattatacttgaatccaggtccccttgtagtatt
tcatcgcgtaattttagtggcgaacaagttttgtcttccccatcttcctcttcctcctcc
tcctctagtatgaggccgagggataaatggtttaatctggcccttcgtgaatgctctgct
acgttagagaatattgatctctggcgtcagagctatcacgaacccatggtcatagatgtt
gtcctggtccagagacaatttggtttggactcggttgatgtttctcctaggaaagatctt
gttaggaacttgtccatgaaggagtttggatgtcagtccatgagtgaaaaggttgtcgag
agatggatggtgcattatgaaagtaggaagaatcgggatagtaattcaggtagcagaagg
tcgagtaatagtactgctcatacctataagaaaaccattttactcttgagatctttatat
gcccttttgaggcttttacctgcacataaggtttttcaggatattagttcatctagtcaa
attcatccctttactcttgctcatcgtgtgtcgtcctttgtcgagccgttctctcggaga
gaagaggctgaaatgcagcattttgtgttcactcctgtggatacttcttgtggtagactc
tgtctctcggtgttataccgctcgtcgctctctgaaataacctctgaaccatcaactcca
atgtctcctcaagtaattcctgaatatgttgggagcccgttagccgatccattgaaaagg
tttccaacacttcctgtaacaatagcaacatctcatggatcttcatcgtcgttgccattc
tcaagacgacatagttggagttatgaccaatgtagaccctcccccccaatctcgttttct
ccttcaccaacgaattcagagtctcatgctacaatttcaaatccagccttttgtcgtttg
cctccttcaagcttgccttcacaaatggttatgggacataaagataatatgaattatgat
gaatattatccttccctcgtcttttcgccctcaccacccattggcattcctgtaaagcga
ttaccaaacggtcgattgcaatctgaaagcgctcctcaaagtgcacctacagcaaagctt
ccccactcccctgcattgttaagcagaccgaatttgccgccatcgcctcccctcaaagcg
tttggaccaggtattcctagaatcaatagagatgttggtccattgcaggcaggctctgca
tttggaaagtcatcatctttcggaagagatgaaagccgaagaatttcgggctggagggta
tcatcaaataactcaccgatttctagaagtcccagtacatcttttccagatgatttagat
gatccagagtttccttgcccctttgatgatgataatgagatgacagatggaggtagcaga
cccgagtcattcgaccctaaaggcagcagcaatctctgcgacatgctcgaacccagtgga
tttttcccaatccgaaaatcacaagacgcagctgttggcgccctagtacgtatgcttcaa
aaggctccaccacttcgccaagacttcactaattcaagcccgaatctctcacgacccccg
acacctggttcctcaagcagcagaaacatccagcagcagggaacccagatatgtgagacg
atagcgccttcaaagggtcggtacgccgcttcctctagcatcacagcctctaaaactaca
ggtgatgcattggaagaactagagagctacagagagatgaagaatttgcttctcaggcaa
tga
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