Cucurbita pepo subsp. pepo (vegetable marrow): 111781184
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Entry
111781184 CDS
T05351
Name
(RefSeq) protein SHORT-ROOT-like
KO
K27743
protein SHORT-ROOT
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111781184
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Other transcription factors
GRAS
111781184
BRITE hierarchy
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GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
111781184
NCBI-ProteinID:
XP_023517414
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Position
LG19:complement(5347449..5349872)
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AA seq
492 aa
AA seq
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MDTLFRLVNLQSEQSYNSSRSRTNSSSSRSSRQNQYHYHQQEDEECYNVLMDEEDFSSSS
NSRQYYNPYLPNPSSTVSTTPTATTPTPIDQFSFVSPAPDFNFEFSGRWAPDILLETARA
ISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFTRMTDSGDRNYRALSSASEKT
CSFESTRKMMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEA
LATRTDDTPHLRLTTVVITKPGDGSGVAASQKVMKEIGTRMEKFARLMGVPFKFHTLYHS
GDLSDLDLAKLDIKEDEALAVNCIGALRSVAAVDNRRDFLIASFRSLRPRIITVIEEEAD
LDVGVDGIEFLSGFQECLRWFRVYFETLDESFTRTSNERLMLERAAGRAIVDLVACSAAE
SVERRESAARWAQRLHGSGFSPLIFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWK
EQPVVWASAWKP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggataccttgtttcggcttgtcaatcttcagtccgaacaatcttacaactccagtaga
agtagaaccaattctagcagctccagatcgtctagacaaaaccaatatcattaccatcaa
caggaagacgaagaatgctacaacgttctcatggatgaggaagatttctcatcgtctagt
aattctagacaatactacaatccttaccttcccaacccatcttccaccgtctccaccacg
cccaccgccaccaccccaaccccgatcgatcaattctcattcgtctcccccgctccggat
ttcaacttcgaattttccggcaggtgggcccctgatattctcctggaaaccgccagggcc
atttctgacaggaatagtgctcgtgttcagcagctgatgtggatgctaaacgaacttagc
tccccctatggggatacggatcaaaagctagctgcctatttcctgcaggccttgtttacc
cgcatgactgattccggcgaccgtaattatcgcgctttgtcctccgcctcagagaaaaca
tgctcattcgaatcaactaggaaaatgatgctcaagtttcaggaggttagtccctggacc
acttttgggcatgtttcttgcaatggcgcattaattgaagccttagaaggcgaatcaaag
ctacacataatcgatatcagtaacacgtattgcactcagtggcccactttgctagaagcc
ctcgcgactcgtaccgacgatacgccccacctacgcctcacaactgtcgtcatcactaag
cccggcgatggaagtggagtagccgcatctcaaaaagtaatgaaggaaataggtacaaga
atggaaaagttcgctaggcttatgggcgtacctttcaaattccacacgctataccattcc
ggtgacctttcagatttggacttggccaaattagacatcaaagaagacgaggcactcgcc
gtcaactgcatcggagcgttacgttccgtggcggcagttgataaccgccgagatttcttg
atagcatctttccgcagtttacggccgcggataatcacggtgatagaagaggaagccgac
ctcgacgtaggcgtcgatgggattgaatttctgagtgggttccaagaatgtctgcgttgg
tttagggtttacttcgagacattggacgagagtttcacgaggacaagcaacgagcggttg
atgcttgagagagcagccggtagggcaatcgtggacctggtggcttgctcggcagcggag
tcggtggagagaagggaatcggcagcgcggtgggcacagcggttgcatggaagcggtttc
agtccgctgatattcagcgacgaagtatgcgacgacgtaagggcactattgaggaggtac
aaggaagggtgggcaatgacacagagctcagacgtcgccggaatattcttgacgtggaaa
gagcagccggtggtgtgggccagtgcatggaaaccttga
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