KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111781187
Entry
111781187         CDS       T05351                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    111781187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpep04121]
    111781187
   03036 Chromosome and associated proteins [BR:cpep03036]
    111781187
Enzymes [BR:cpep01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111781187
Ubiquitin system [BR:cpep04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111781187
Chromosome and associated proteins [BR:cpep03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     111781187
    Noncanonical PRC1 (PRC1.1)
     111781187
    Noncanonical PRC1 (PRC1.3/1.5)
     111781187
    Noncanonical PRC1 (PRC1.6)
     111781187
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-UDP zf-rbx1 zf-RING_4 zf-Nse zf-RING_6 zf-RING_11 zf-C3HC4_5 ZNF512_C2HC
Other DBs
NCBI-GeneID: 111781187
NCBI-ProteinID: XP_023517419
LinkDB
Position
LG19:7134368..7139642
AA seq 425 aa
MPAQKRAHEADDVQLLPLLHDSFDERSEDGESEESDRCPSSSQGDMDEFIPVKLSDIRRE
VQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDT
LIAVLYPDIDKYEEEELAFQEEEKARNKQIQASIAQILQRQTEALGRKRPKPSRRLSSRG
RKNFQNHIDSLGFDENEDENDYEVSKNSSSADERMDTRPKRSRRGCPVRFSLSSSATGAD
GADGGGNENDYEVNKESVGASTGLVGSSERLSWGKGGIRSHTRYGGTNGGTGKISRTNRH
TKLSDYVRNTENISEELDVHLMLVSMDENRIPALQRPFLCCRPSVTIGHLSQYVALETAL
SVDVVEMYMVKELQMKLNPSTSRTLMDPCKDSVQILNEQETLSMVKLKTHCLACGYLLLA
YQIKG
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgccggctcagaagcgcgctcatgaggctgacgatgttcagcttttgccgctactccat
gatagcttcgatgaacgttctgaagatggagaatctgaggaatccgatcgatgcccttcg
tccagtcaaggagatatggatgaatttataccggtgaaattgtcagacatccggagagaa
gttcaatgtcctatctgcttaggaatcatcagaaaaactagaaccgtgatggaatgcctg
caccgtttctgcagggaatgcattgacaaatcgatgcgtctaggtaacaatgaatgccct
gcttgccgcactcattgtgccagtcgacgctctttgagagatgacccaaattatgatacc
ttgattgctgtgttatatccagatattgacaaatatgaggaagaggaattggctttccaa
gaagaagagaaagctcgtaataagcagatccaagcttccattgctcagatacttcaacga
caaactgaagctttgggtagaaaacgtcctaaaccttcaaggagattgagttctagagga
cgaaaaaacttccagaatcatattgacagtctaggctttgatgaaaacgaggatgaaaat
gattatgaggtaagcaaaaattcatcttctgctgacgagcgaatggacacacgacctaaa
agatccaggagaggatgtcctgttagattttccttgtcttcttcagctactggggctgac
ggggcagatggtggtggtaatgaaaatgattatgaagtgaacaaagaatcagttggtgca
tctacggggcttgttggtagctcagaaagactttcatggggcaaaggtggaataagaagt
cacactagatatgggggtactaatggagggaccggtaaaatctccaggactaaccgccac
acaaagctgtcagattatgttcgaaacacggaaaatatcagcgaagagttggacgtccac
cttatgctcgtttccatggatgaaaatagaatacccgcattgcaaagaccattcctttgc
tgcaggccttcagtgacgattggacacttaagtcaatatgttgctctcgagactgcgctt
tccgtcgatgtcgttgaaatgtacatggtgaaagagctgcaaatgaaactcaatccttca
acctcgagaactcttatggacccatgtaaagatagtgtacagatattaaacgagcaagaa
acgctgtcgatggtcaaactcaaaacgcactgtctagcttgtggctatctgcttttggca
tatcagataaagggctaa

DBGET integrated database retrieval system