Cucurbita pepo subsp. pepo (vegetable marrow): 111781279
Help
Entry
111781279 CDS
T05351
Name
(RefSeq) uncharacterized protein LOC111781279 isoform X1
KO
K14315
nucleoporin NDC1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111781279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111781279
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111781279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
111781279
NCBI-ProteinID:
XP_023517550
LinkDB
All DBs
Position
LG19:7782609..7786543
Genome browser
AA seq
548 aa
AA seq
DB search
MPSSSLFFGPPEMVVKNRFLGFLIWQSIPSTFVFFLFKIFVSAIFSVSGSNSSSGTSNPS
APFASMFTGFFTFLTFHLSQLLFSASLSLLASPQLERPAAPLELTFGLVRFLVVSGGDNA
SSTSAFNDFRRRATVSLYLLLFVVATAISGSLAAVSICWGKSDGLRSAWHTGLSMGLIYG
AFYVYNKRWVLTFPIIQRPPFFSFKMGFPAATRLASKLSAAAFLFSAVLMVLLPDQFKRN
VTVRKFIANQAIIFVGSFAIFLSWELTQHLHQVLHTKRYAFAPPKGSAAAETNPSEYLFA
ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRIISISLKPLEQFALN
LGQGLEGAVDITSQLSPKDSHFNVKQFETLKNFQLYAWCARTVSMLTARSHAEDRFGVAQ
LSGSNATVMSTLLSCLLAVEVLMGKKTTIQSSHGLFGPASIKWATSSIGRVDASVGKRKS
GPLHSKAYAIANVLRVSIYVVVSAFHNEMVNSAKSGVLEKDWITSEKPLYGTRELLLQKL
HIFLDFQA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtcttctctgtttttcggacccccggaaatggttgtcaagaatcgctttctg
ggtttccttatttggcagtccattccttcaaccttcgtctttttcctcttcaaaatcttc
gtttcagccattttctctgtttctggtagcaattcctcgagtggaactagcaatccatca
gccccttttgcgtcaatgttcactggattcttcacttttcttacatttcatctctctcaa
ctcctcttctctgcatctctctctctccttgcttcgcctcagctcgagcgccctgccgcg
ccgcttgagctcacttttggactcgttcggtttctcgtagtttcaggcggtgacaatgct
tcatcgacgtcggcgttcaatgattttcgccgtcgtgctacggtttcgttatatttgctt
ctgtttgtagtggcaactgcgatttcaggttccttggcggccgtctctatatgttggggg
aaatcggacggtctcagaagtgcttggcatacgggtctttcgatgggactgatttatggc
gctttctacgtttacaacaaaagatgggttctaacgttcccaatcatacagcgtccccca
tttttcagcttcaagatgggttttcctgcagctaccagattggcttccaaactttctgct
gcagctttcctgttttcagctgtattaatggtgcttttgcctgatcaatttaagagaaat
gttacagtcaggaagttcatagctaaccaggccattattttcgttgggagctttgcaata
tttctttcttgggaattgactcaacacttgcatcaggtcctgcataccaagaggtatgcg
tttgcacctccaaagggatctgcagcagcagaaacaaatcccagtgagtacctctttgca
gctttagaggacagcaattcagggtctcttttgcaatatcttgcatttcttgatctctgc
atggtttgtgagaacaatgtggatatatggaggagagctgcattttttgaagaaacaggt
gagacatataagcgaattatatccatttccttgaagcctttggagcaatttgcactgaac
ttaggccaaggtttggaaggtgctgtggacattacctcccaactatcgccaaaggactct
cacttcaacgtaaaacaattcgaaactcttaaaaactttcagttgtatgcatggtgtgct
cgaacagtttctatgttgactgcacgctcacatgcagaagatcgattcggtgttgctcaa
ctctctggtagtaatgcaactgttatgtcaacactgttgtcttgcctgcttgctgttgaa
gtgttgatgggtaagaaaacgactatacagtcttcacacggtttattcggcccggctagt
attaaatgggcaacgtcaagtattggaagagtagatgcttcggttggtaaaaggaaaagt
ggtccgctgcattcgaaggcatatgctattgcgaacgtattgagggtgtcgatctatgtc
gtcgtttctgcattccataacgagatggtgaatagtgccaagtccggtgttcttgagaaa
gattggatcactagtgaaaagcccctttatggtactcgtgagttgcttcttcagaaattg
catattttcttggactttcaagcttag
DBGET
integrated database retrieval system
