Cucurbita pepo subsp. pepo (vegetable marrow): 111781403
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Entry
111781403 CDS
T05351
Name
(RefSeq) tRNA (cytosine(34)-C(5))-methyltransferase-like
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111781403
Enzymes [BR:
cpep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
111781403
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111781403
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GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
Motif
Other DBs
NCBI-GeneID:
111781403
NCBI-ProteinID:
XP_023517733
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Position
LG19:5797645..5805696
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AA seq
838 aa
AA seq
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MGGKGRGGRARTQRKHFRESRENVWKRPKPDPNSANDNKDGNGNHWEPFESQSHAFNEYY
KEQGIVTAEEWNTFIEVLRKPLPAAFRINSSGQFCGEIRAQLQNDFTKSLQAEVTDGDEA
EAIRPLPWYPDNLAWHSNFSRMQLRKNQALESFHEFLKLENEIGNITRQEAVSMVPPLFL
DVHPNHYVLDMCAAPGSKTFQLLEIIHQSSKPGDLPDGLVVANDLDVQRCNLLIHQTKRM
CTANLIVTNHEAQHFPGCRANTNFFSASTAGNELKPRSTQLTFDRVLCDVPCSGDGTLRK
APDIWRKWNSGMGNGLHGLQVQIGMRGASLLKVGGRMVYSTCSMNPVENEAVVAELLRKS
GGSLELVDVSNELPQLVRRPGLKKWKVCDKGVWFASYEQVTESCQSVAIPGMFPSGRGRK
SDTHNSELRGNHPDGGSSVDVSEPTMDPVHVFDEEVCEFPIERCMRIVPHDQNTGAFFVA
VLRKVAPLPAATEKTSDQNTKSANDQSRGKLQQTTTDADSVDLNATDGMGESSSEVEIDP
NNQRDSNSANNNPPCKLPVQDNKDADGLDSTDGMDKQFSEADMEVVENETTENKLEITAI
KNNSEESKQPGDGEMDPKKCNGKRKLQIQGKWRGVDPVVLFKDETVIDCIKTFYGINESF
PLIGHLVTRNSDTNHVKRIYYISNSVKDVLELNFSAGQQLKITSIGLKMFERQSSREGSS
APCAFRISSEGLPVLLPYITKQILTMSPVDFKHLLQYKSIKYADFVDAAFGEKASNLMLG
CCVIVLGAGNTSSEVIKVDESTIAIGCWKGRASLSVMVTATDCQELLGRLSNRLGNDL
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcaaggggaggggcggcagagctcgtactcagagaaagcattttcgagagagc
agagagaacgtttggaagcgtccaaaacccgatcctaactctgccaatgacaacaaggat
ggcaatggcaatcactgggagcctttcgaatctcaaagtcatgcgttcaatgagtactac
aaggagcaaggcatagttactgcggaagaatggaatacgtttattgaggttcttcgtaag
ccattgcccgctgcttttaggatcaattctagtggacagttctgtggggaaatacgagct
cagttacaaaacgacttcacgaaatctcttcaggctgaggttactgatggtgatgaagct
gaggctattagaccattgccttggtaccctgacaatcttgcgtggcattcaaatttttca
agaatgcaactacggaagaatcaagctctcgagagttttcatgaattcttgaagctagaa
aatgaaattgggaacattacaaggcaggaggctgtcagcatggtacctcctctttttctg
gatgtacatccaaatcactatgtacttgacatgtgtgctgctccaggctccaaaacattt
caattacttgagatcatacaccaatccagcaaacctggagatctacccgatggattggta
gtggcaaatgatttagatgttcaaagatgtaaccttctcatccaccaaactaaaagaatg
tgcactgccaacctcattgttacaaatcatgaagcacaacattttcctggctgtcgagca
aataccaatttcttcagtgcatctacagcagggaatgaactaaaacctcgtagcactcaa
cttacatttgatcgtgttttatgtgatgttccctgtagcggagatggtacacttcgcaag
gctccagatatatggaggaaatggaattctgggatgggtaatggtttacatggcttgcaa
gtgcagataggcatgcgaggtgcctctttacttaaagttggtggaagaatggtttactca
acttgctcaatgaatcctgttgaaaacgaggctgttgttgcagagcttttgcgaaaatct
ggaggctctcttgaactcgttgatgtctcaaatgaacttccacaacttgttcgtcggcct
ggtcttaagaaatggaaggtgtgtgataagggtgtatggtttgcgtcctacgaacaagtt
accgaatcttgccagagtgtggcaatacccggcatgtttccttctggcagaggccgtaaa
agcgatactcataactcagaattgaggggaaatcatcctgacggtggaagttctgttgat
gtatctgagccaacaatggatcctgtacatgtgttcgatgaggaggtttgtgaatttcca
atcgagcgttgcatgaggatagtgcctcatgatcaaaatactggagccttctttgttgca
gtattacgcaaagttgcccctttgccagctgctactgaaaaaacaagtgatcagaatacg
aagtctgcaaatgaccagtctcgtggcaagcttcaacagactactacagatgcagatagt
gtggaccttaatgcaacagatgggatgggcgaaagctcctcagaagttgagattgatccc
aataatcaaagggactccaattctgcaaacaataatccaccttgcaaacttccagttcag
gataataaagacgcagatggtttggacagtacagatgggatggataagcagttctcagaa
gctgacatggaggtagttgaaaatgaaacgactgaaaataaattggaaattactgctata
aaaaataactcagaggaatctaagcagcctggtgatggtgaaatggatcctaagaagtgc
aatgggaagagaaagttgcagattcagggcaagtggaggggtgttgaccctgttgtatta
ttcaaagatgaaaccgtcattgattgcataaagacattttatggtattaatgagtctttc
ccattgattggccaccttgttactcgaaatagtgacactaaccatgtgaaaagaatctat
tacatttctaactctgtcaaggacgttcttgagctgaatttttcagccgggcagcaactt
aagataacatccattggtctgaagatgtttgagaggcaatcatcaagagaaggtagctct
gcaccctgtgcattccgcatatcgtcagagggattgcctgtgttacttccgtacatcacc
aagcaaatcctaactatgtctccagtggatttcaagcatctattacaatataaaagtatc
aaatatgcagattttgtggatgctgcttttggtgaaaaggcatcaaacttaatgctaggt
tgctgtgtgatagttctgggtgcaggtaacacctcttccgaagttatcaaagttgacgag
tcgactatagccattgggtgctggaaagggagagccagtctgagtgttatggtcacggcc
actgattgccaagaactacttggaaggctttccaatcggcttggaaatgatttgtag
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