Cucurbita pepo subsp. pepo (vegetable marrow): 111781444
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Entry
111781444 CDS
T05351
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpep01009
]
111781444
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111781444
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111781444
Protein phosphatases and associated proteins [BR:
cpep01009
]
HAD phosphatases
Fcp/Scp phosphatases
111781444
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111781444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
ECM10
Motif
Other DBs
NCBI-GeneID:
111781444
NCBI-ProteinID:
XP_023517798
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Position
LG19:complement(2496000..2502552)
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AA seq
818 aa
AA seq
DB search
MSRLGFKSVVYHGDVRLGELDAIPATDQDFQFPNNEIRIHRISPPSERCPPLSVLQTISS
FSLRCKLQSSLPVEQPHLIQLHYSCFHELKTAIVMVGDEEIHLVAMPSKQKNFPCFWCFA
VPSGLYVSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRVWLTRETDPLRVSGM
SAELRRYLEDRLLLKQYIENDTVNDNGRIYKVQLEEVPPLNGTCEKVVRPIIRLLDKNIV
LTRINPEIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPEA
HLIATKQLLDRVVCVKSGSKKSLLNVFQSGTCHPKMAMVIDDRSKVWEDKDQPRVHVVPA
FTPYYAPQAEIANVVPVLCVARNVACNVRGCYFKEFDESLLRRILEISYEDDVIDLPPAL
DVSSYMMSEEAGFVSNEIVNAPVGEGMNGVEVERRLNQPDDKHVIDMANNPITSHTVVRA
DTSQLLTPNPNVVGPKSSRPLLPSQKPGLLGAPVRRDLSSDCDYDMKRGLLATKPGIDLR
APHFGEPPILPRMPVQLSASGLQVQGNSFVDDDSSKGHHNSRSSGFIQESEASKADKHRS
HQIPFSNNPQGIAISQNRASSNNKESQQPEAGKVTIPPPSLYIGVLQEIGRRCGSKVEFK
TVVSTSKDLQFSFEVLFTGEKIGVGLGKTRKDALQQAAENALHNLADKYAAHMKPLLGPG
VDADLDKLSIGGENGFLWDNVAPEVKKENKWEASDEPETTNSVSANQQNVQKRQCSPRSF
PSKRSKEEEEEEEEEEEEEEEEEEEVGSLRQKNGNSIT
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgagccggttagggttcaaatcggtggtctatcatggcgacgtgcgtcttggggaactc
gacgctattccggcgacggaccaggattttcagtttccgaacaacgagattagaatccac
cgcatatcgccgcccagtgagagatgccctcccctttcagttcttcagacaatttcttca
ttttctctcaggtgtaagctccaatcttccttacctgttgaacaacctcacttgatccag
cttcattactcctgcttccatgaattgaagacagcaattgtgatggttggggacgaagaa
attcacctggttgcaatgccgagcaagcagaagaattttccgtgcttttggtgttttgcg
gtgcccagtggtctatatgtatcctgtttaggaatgctaaatctcaggtgtcttgcgatt
gtttttgatctagacgaaacgcttattgtagcaaacactatgaaatcttttgaagataga
attgaagctcttcgagtttggctcacgcgggaaacagatccattgcgtgtatctggaatg
tcagctgaactcaggcggtacctggaagatcgtttgctgctaaaacagtatattgagaac
gacactgtaaatgataatgggaggatttataaggtgcagctggaggaggttcctccccta
aacgggacctgcgagaaagtagttcgtcctataattagattgctggacaagaatattgtt
cttactcgcatcaatccagagattcgtgataccagtgttcttgtgaggttacggcctgca
tgggaagacttaagaagctatttgactgctaggggtcgtaagcgttttgaagtttatgta
tgtaccatggctgaaagagattatgcattagaaatgtggaggcttcttgatccagaagca
cacctgattgcaacaaagcagcttcttgaccgtgttgtttgtgtcaaatcaggttctaag
aaatctttgctgaatgttttccaatccggtacatgtcatccaaagatggcaatggttatt
gatgaccgttcaaaggtttgggaagacaaagaccaaccacgtgtacatgtagttccagca
tttactccttactatgctcctcaagcagagatagcaaacgtggtccctgtcctctgcgtg
gcaaggaatgtcgcgtgtaatgtcaggggttgttacttcaaagaattcgatgagagtttg
ttgcgacggattcttgaaatttcatatgaagatgatgtcattgatctacctcctgctctt
gatgtgagcagttatatgatgtcagaggaagctggttttgtatccaatgagattgtgaat
gctccagttggtgaaggaatgaatggtgttgaagtggaaaggagattgaatcagccggat
gataagcatgtaatagacatggctaataatcctattacaagccatacagttgtaagagca
gatacttctcagttgcttactccaaatccaaatgttgttggaccaaaatcttcaagacct
ctactgccttctcaaaagcctgggttgcttggagcccctgtcagacgagatctctcttct
gattgtgattatgacatgaagagaggactccttgctacgaaacctggtattgatcttcgg
gctccgcactttggtgaaccccctatactccccagaatgcccgtacaactatcagcatcc
ggattacaggtgcaaggaaattcattcgtggatgatgactctagtaaaggacatcacaat
agtcgatcttcaggatttattcaagaatctgaagcttcaaaagctgataaacatcggtct
catcagatcccattcagcaataatccacaaggaattgctatatctcaaaatcgagcatct
agcaataacaaagaatctcaacaacctgaagcagggaaagttactatacctccgccctct
ttatacattggagttctacaagaaattggtcgtagatgcggctcaaaggtggagttcaaa
actgttgtcagtaccagcaaggatttgcaattttcatttgaggttttgtttactggcgag
aagattggtgttggattgggtaagacgaggaaagatgctctacaacaagctgcggagaat
gcacttcacaatttagcagataagtatgctgcacatatgaagcctcttttgggacctgga
gtagacgcagatctcgacaagctttcaattggaggcgaaaatggattcttatgggacaat
gtagctccagaagttaagaaagaaaacaagtgggaggcttctgatgaacctgagactact
aactctgtttcggcaaatcaacagaatgttcagaagcgccagtgttccccgagatcattt
cccagtaaacgatcaaaggaggaggaggaggaggaggaggaggaggaggaagaagaagaa
gaagaggaagaagaagtaggatctttgaggcagaagaatgggaattccattacttga
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