Cucurbita pepo subsp. pepo (vegetable marrow): 111781453
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Entry
111781453 CDS
T05351
Name
(RefSeq) probable beta-D-xylosidase 5
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00520
Amino sugar and nucleotide sugar metabolism
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
111781453
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
111781453
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
111781453
NCBI-ProteinID:
XP_023517807
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Position
LG19:complement(7567682..7570690)
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AA seq
764 aa
AA seq
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MSNFTFVCDPSRYVNLGLDISSFRFCNSSLSFPERSKDLVDRMTLSEKVAQLGHRALGVA
RLGLPPYNWWSEALHGVSNVGPGTRFDDVVPGATSFPNVISMAASFSEAMWKTIGQVVST
EARAMYNLGRAGLTYWSPNVNVVRDPRWGRTLETPGEDPFVVGKYAVNYVRGLQDVEGTE
NATDLNSRPLKVSSCCKHYAAYDVDNWLGVERYTFDAKVTEQDMLETFLKPFEMCVKEGD
VSSVMCSYNKVHGLPTCADPALLKDTIRGDWDLHGYIVSDCDSIEVMVDHQHFLQDTNED
AVAQTLKAGLDLDCGQFYPNFTEDSVRQGKVGVKNIDKSLNYLYVVLMRLGFFDGSPEFQ
SLGSRDICNDEHIELATESARQGMVLLKNDNDTLPLDTSTIKTLAVVGPHANATSVMLGN
YAGVPCRVKSPIDGLSGYAKVNYQMGCENVACRNDTFIFGAMDAAKNSDATVILGGIDLS
IEAESLDRVDLLLPGFQTQLIQQVAAVSKGPVVLVIMSAGGIDISFAKNSPNIKAIVWAG
YPGEEGGRAIADVIFGKFNPGGRLPVTWYEADYVNQLPMTSMPLRPVKSLGYPGRTYKFY
DGTVVYPFGYGLSYTSFTHTLVSASRSLAVNLDKTIQCRDMSYEDTAFKPDCAAVLVDDL
TCSEEFEFEIKVENTGKKDGSQVVIVYSKPPSGISSTHIKQVVGFQRVFVDAGGNESVKF
KLNACKSLGLIDFSGYNLLPAGGHTIVVGDGDVSFPVQLSFHGN
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacttcacttttgtctgtgatccatctcgatatgtcaatcttgggttagatatt
tcttcatttcgcttttgtaattcatccctctcttttccggagaggtctaaggatctagta
gatagaatgacattatctgagaaagttgctcaacttggccaccgtgcccttggagttgct
cgcctcggtttgccaccgtacaattggtggtcagaggctcttcatggcgtctccaatgtt
ggccctggtactcgatttgatgatgttgtgccaggtgccactagcttccccaatgtcatt
tccatggcagcatcattcagtgaagctatgtggaaaacaatcggtcaagtggtttcaacg
gaagcaagagctatgtataatcttgggagggctggattgacatattggagtccaaatgta
aatgtagttcgagatccaagatggggacgaaccttggaaacacccggcgaggaccctttt
gtggttggcaaatatgcagtgaactatgttagaggtctccaagacgtggaaggaactgaa
aatgccactgatttgaactctaggcctctcaaggtttcttcttgttgcaagcactatgct
gcctatgatgtcgacaattggctcggggtcgaacgctacacttttgatgctaaggtgacc
gaacaagacatgttggagacattccttaagccatttgagatgtgcgttaaggaaggagat
gtcagcagtgtgatgtgttcttacaacaaagttcatggccttccaacttgtgctgatccg
gctctcttgaaggacaccattagaggcgattgggaccttcatggatacattgtttcagac
tgcgactcaattgaggttatggttgatcatcaacattttctgcaagatacaaatgaagat
gctgttgctcaaactctcaaagcagggttggatttggattgtggtcaattttacccaaat
ttcacagaagactcagtaaggcaagggaaagttggagtgaagaacattgacaagtctcta
aactatctctacgttgttctaatgagacttggattcttcgatggaagccctgagttccaa
tcacttggaagcagagatatttgcaatgatgaacacattgaattggccactgaatctgcc
agacaaggaatggttcttctcaagaatgataatgacactttgcctcttgatacttctact
atcaaaactctggctgttgttggaccccatgccaatgctacctctgtcatgcttggaaat
tatgcaggagtgccatgccgagtgaaatctccaattgatgggctatcaggatatgcaaaa
gtgaactaccaaatgggttgtgagaatgttgcttgcagaaacgataccttcatatttgga
gccatggatgccgccaagaattctgatgcaaccgtgattcttgggggtattgacttgtcc
attgaagctgagagcttggacagagttgatcttcttcttcctggtttccaaactcagctc
atccaacaagttgcagctgtctctaagggccctgttgttcttgtcatcatgtcggcgggt
ggcatcgacatctctttcgctaagaatagtcccaacatcaaagctattgtctgggctggt
tatcccggcgaagagggcggccgcgccattgccgatgttatctttggaaaattcaaccca
ggaggaagattaccggtaacatggtatgaagccgactacgtcaaccagctaccaatgaca
tcgatgcctctccggccagtgaaaagccttggctatccaggaagaacctacaaattctac
gacggcactgtcgtctaccccttcggctacggcctcagctacacctctttcacccatact
ctagtctccgccagccgatccctcgccgtcaatctcgacaaaacaatccaatgccgcgac
atgtcctatgaggacactgccttcaagcccgactgcgccgccgtcctcgtcgacgaccta
acttgctccgaagagttcgagtttgaaatcaaagtcgagaacaccggcaaaaaggacggt
agccaggttgtgatcgtgtactcgaaaccaccgagcggaatttcttcgactcatatcaag
caggtggttgggttccagagggtgtttgtggatgctggggggaatgaatcggtgaaattt
aagttgaatgcttgtaagagcttggggctaattgatttcagtggctacaatctgctgccg
gcgggtgggcacaccattgtggtgggagatggagatgtttctttccctgtgcagcttagc
ttccatgggaattaa
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