Cucurbita pepo subsp. pepo (vegetable marrow): 111781579
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Entry
111781579 CDS
T05351
Name
(RefSeq) protein AUXIN SIGNALING F-BOX 2-like
KO
K14485
transport inhibitor response 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111781579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111781579
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111781579
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_At1g61320_AtMIF1
F-box
Motif
Other DBs
NCBI-GeneID:
111781579
NCBI-ProteinID:
XP_023518017
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Position
LG19:complement(6955573..6959303)
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AA seq
584 aa
AA seq
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MSSKRKKELGDLDESKRAGSIFPDEVLERVLSLVKSHKDRSSVSLVCKDWFNAERWSRTH
VFIGNCYSVSPEIVIRRFPNIRSVTLKGKPRFSDFNLVPPNWGADVHSWLLSFASKYPIL
EELRLKRMTVTDESLEFLARSFPNFKALSLMSCDGFSTDGLAAIATHCKNLTDLDILEND
IYDKSGSWLSCFPDTLKSMEVLNFASLNSDVSFEALEKLVKRCKSLKVLKVNRNINLEQL
QRLLVHAPQLTELGTGSFSQEITLRQYYDLEHAFKNCNNLHTLSGLLESTVLYLQVLFPA
CANLTFLNLSYATLHGGELAGLLSHCPVLRRLWVLDTVEDKGLKAVGLSCPLLEELRVFP
ADPYADNLVHGVTESGFLAVSYGCRKLHYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIM
NPCQPDYLTKQPMDEAFGAVVKTCSKLRRLAISGLLTDLTFEYIGKYATNLETLSVAFAG
TSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLSGLERYESMRSLWMSACKVTMNGCRVLA
KQVPRLNVEVIKAGGSDECEAESVYVYRSVAGRRRDAPSFVLTL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaagaggaagaaggaattgggagacttggacgagtccaaacgggctggttcg
atcttcccagatgaggttttggagagagttttgagtttggttaagtcccacaaagataga
agctctgtatctttggtttgtaaagattggttcaacgcggagcgatggtcgcgaacccat
gtttttatcggaaattgctactctgtttcgccggaaattgtaatccgacggttccccaac
attcggagtgtgacgctgaaagggaaacccagattctcggatttcaatttggtgcctccc
aattggggtgctgatgttcattcatggctcctttccttcgcttcaaaatacccaattctt
gaagagttgaggctcaagaggatgactgttactgacgagagcttggaatttttggctcgt
tccttcccaaatttcaaagcgctttcattgatgagctgcgatggtttcagcaccgatggg
ctcgccgccattgccactcactgcaagaacttgacggaccttgacatacttgagaatgat
atctatgacaaaagtggaagttggctgagttgcttcccagataccttgaaatcaatggaa
gtactcaactttgcaagtttgaacagtgatgtcagtttcgaggcgctcgagaagctagta
aaaaggtgcaaatcattgaaggttttgaaggttaataggaacataaacttggaacagttg
cagaggctgcttgtacatgctcctcagttaacggagttaggcacgggttctttttcgcaa
gagatcactcttcggcagtactatgatctcgaacacgcctttaaaaattgcaataatctg
catactctgtctggtttattggagtcgacggtgttgtatctccaagttctttttcctgcc
tgtgcgaatttaactttcttgaatctgagctatgctacgctacacggtggtgaacttgct
ggacttctttcgcactgccccgttcttcgtcgcctttgggtcttagacacagttgaagac
aagggcctgaaggctgttggactaagttgcccgttgctagaggagctccgtgtatttcca
gccgatccttatgctgacaatttggttcacggtgtaaccgagtcggggtttcttgctgtc
tcgtatggctgccgtaaactccattacgttctctacttttgtcgccagatgacgaatgag
gctgtagccaccattgtgcagaactgcccagatttcacccattttcgtctctgcattatg
aacccttgtcaaccagactatcttacaaagcaaccaatggatgaggcatttggtgcagtc
gtgaaaacttgctctaagctacgtagactcgctatttcgggcttgctaacggacttaaca
tttgaatacatcgggaaatatgcgacaaacttggaaacgctctcagtggcttttgctgga
accagtgactggggaatgcagtgtgttatgagtggttgtccaaagctgagaaaactagag
atcagagacagcccatttggaaatgcagctttgctttctggtttagagaggtacgaatcc
atgagatcgctatggatgtcagcttgcaaggtgacgatgaacggttgtcgagttttggca
aagcaggtgccaaggctgaacgttgaggtcattaaggccggtgggagtgatgaatgcgag
gctgaaagtgtttacgtataccgctctgttgcaggtcgaagaagagacgccccgtctttc
gttctcaccctctaa
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