KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111781637
Entry
111781637         CDS       T05351                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111781637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpep03041]
    111781637
Spliceosome [BR:cpep03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111781637
 Complex B
    111781637
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 111781637
NCBI-ProteinID: XP_023518094
LinkDB
Position
LG19:4008616..4011551
AA seq 311 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
GVDPQGQSLDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE
QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
RRRLFGRNRRRRSRSRSQSQSPHRHHGYDERPHGGRERGSSRRDGDKDPRYHDRSRRPRS
RSPRHRGGRSRSPGGRRNRSPGRESSVERRAKIEQWNRDREKADNGSGHQDDGGSNDLVQ
NEDEFDPSKQY
NT seq 936 nt   +upstreamnt  +downstreamnt
atggcggaacacttggcttcaattttcggaacggagaaggatagggttaactgccccttc
tacttcaagattggagcctgccgacatggagatcgctgctcccggcttcacactaagccc
agcatcagccctacacttcttctctctaacatgtatcagagacctgatatgatcaccccc
ggcgttgaccctcagggccaatcccttgatcctcgcaaggtccaagaccactttgaggac
ttttacgaagatctgttcgaggagctgagcaaatacggagatcttgaaagcttaaatatt
tgtgataatttggctgaccatatggtgggcaatgtttatgttcagtttagagaagaagaa
caagctgctaatgcgcttcataatcttaatggacgtttctatgcagggcgacctataatt
gttgacttctctccggtgacggatttccgagaagctacttgtaggcaatatgaggaaaat
gtatgtaatcgtggtggctattgtaactttatgcatctgaagaagattagcagagagttg
agaaggcgtttattcgggaggaacaggcgcaggcgtagtagaagccgaagtcaaagccaa
agcccccatagacatcatggatatgatgagcgtccacatggtggtcgtgaacgtggatct
agtagaagagatggagacaaggaccctcggtaccatgatagaagcaggaggcctagaagc
cgtagccctaggcatagagggggacggagtaggagcccgggaggaaggaggaatagaagt
cctggcagggaaagtagcgttgaaagaagggctaagatcgaacagtggaacagggacagg
gaaaaggcagacaatgggagtggtcatcaggatgatggtggaagcaatgaccttgtacaa
aatgaagatgaattcgatccttctaagcagtactag

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