Cucurbita pepo subsp. pepo (vegetable marrow): 111781649
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Entry
111781649 CDS
T05351
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111781649
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111781649
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111781649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_UBOX
zf-RING_2
Beta-prop_SPT8
T6PP_N
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-rbx1
FapA
zf-C3HC4_3
SH3-A_UBE2O
ADIP
Motif
Other DBs
NCBI-GeneID:
111781649
NCBI-ProteinID:
XP_023518105
LinkDB
All DBs
Position
LG19:complement(3864855..3872957)
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AA seq
635 aa
AA seq
DB search
MPDSFPSYVDIQNVLVDGEQYEVEDSDDGEEEEEDDDEETDDGEETVEGHAEENADNVIE
AQSPRASQTGPSRSGQARVSFWVEEEEDKRRRTEGGEASSSNGVGSLEISQGNEWNRNEI
DGLFCPICMEAWTNYGDHHICCLPCGHLYGMSCINRWLQQRRKAGKVSVHAMIXCSMKDV
RKLFASRIVAADEESQKRIQSLEATCASLETKNANWCKKEVEWKKKETDLQSKVHELTER
TNYLEHLLEDTKRKHEVAHLDCIFEGKSVSDHNFGLRFSGQVSSCGFILEKELLVDGARS
IDVDSSNQVVLVARRQSGFGGTHVITKISLMSPYEREDIRIPFCTNAVKDLHISPAARNL
VLYSSLGKKLAVLSMESNNIILDYELPDAAWSCSWDQNSSHYVYAGLKNGSLMMFDMRQT
VGPLKTLRGITSNPVHTIHSLSNNLTLSNDVKSVLSASAYGVCQWNFDASEEGPFLVPET
NQGVCTSLAYCSSRDEIVASYRPKVGMSSEIPYSQISPSPSHTAGHRVDGCHMAFKKEEN
FQKFSKLGSARANIDAIRLPKSTIIDLQDCSSLFVFGDAVMNELILQELPSFRSFQHLKL
HKHPVRDVKYSYGFGRGLLSCLSDDTLQLLCTKGS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccggactctttcccttcttacgttgacattcagaacgttctcgttgacggggagcag
tatgaggttgaagatagtgacgacggggaagaggaagaggaagatgacgatgaagaaact
gatgatggtgaagagacagtcgaaggacatgcggaagagaatgctgataatgtaattgag
gcgcaatcgcccagggcttctcaaacgggtccttcgagatctggtcaagctagggtttcg
ttttgggttgaggaagaggaagacaagcggagaaggactgagggtggagaagcgagttct
tcaaatggcgttggaagtttggagatttcacaagggaatgagtggaatcggaatgaaatt
gacggattgttttgccctatttgcatggaggcatggaccaattacggcgaccatcatatt
tgctgtcttccttgtgggcatctatatggcatgtcttgtatcaatagatggctgcaacaa
cgtagaaaggcagggaaggtatctgtccacgcaatgatttaatgttcaatgaaggatgtt
aggaaactttttgcatcacgaattgttgctgctgatgaagaatctcaaaagagaattcag
tcacttgaagctacttgtgcctctcttgagacgaagaatgccaattggtgtaaaaaagaa
gttgaatggaaaaagaaagaaacagacttgcagtcaaaagttcatgaacttaccgagagg
acaaattatttggagcatttattagaagatacaaagagaaaacatgaagtagcccatctt
gattgcatctttgaggggaaatctgtatccgatcataactttggcttaaggtttagtgga
caggtctcttcttgcggttttatattagagaaagagctgctggtggatggtgctcgttca
attgatgtagattcctccaatcaagttgttttggttgcaagaaggcagtccgggtttggt
ggaacacatgtaattactaagataagcttaatgtctccatatgaaagggaagatataaga
attcctttttgtactaatgctgtaaaggacttgcacatttctcccgctgccagaaacctt
gtgctttattcttcgttagggaagaaattagctgttctcagtatggaaagcaacaatatc
atccttgactatgagttaccagatgctgcttggtcgtgttcatgggatcagaatagttca
cactatgtttatgctggattaaagaatggttcgctcatgatgtttgatatgcgccaaact
gtgggtcccttgaaaaccttgcgaggcataacgagcaatccagtccatacaatacattct
ctttcaaataatttaactctttctaatgatgttaaatctgttctgtctgcttctgcatat
ggcgtatgccaatggaacttcgatgcctcagaagaagggccatttttagttccagaaaca
aatcaaggagtttgtacatctcttgcctattgctcgagccgagacgaaattgttgcttca
tatcgtcccaaagttggaatgtcaagtgagataccttattctcagatttcaccttctcct
tcccacactgctgggcatagagttgatgggtgccacatggcattcaagaaagaagaaaat
ttccaaaaattttcgaagttgggttctgcacgtgccaatatagatgcaatacgcctgcca
aaatctactatcatagacttacaagactgcagtagtttgtttgtattcggagatgcagta
atgaatgaattgatcctgcaggaactgccttcttttaggtcttttcagcatcttaaacta
cataagcatcctgttcgtgacgttaagtattcgtatggcttcggtagaggattgcttagc
tgtttaagtgatgatactctgcaacttttatgcaccaaaggctcatga
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