Cucurbita pepo subsp. pepo (vegetable marrow): 111781795
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Entry
111781795 CDS
T05351
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00500
Starch and sucrose metabolism
cpep01100
Metabolic pathways
cpep01110
Biosynthesis of secondary metabolites
Module
cpep_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
111781795
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cpep01003
]
111781795
Enzymes [BR:
cpep01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
111781795
Glycosyltransferases [BR:
cpep01003
]
Polysaccharide
Storage polysaccharide
111781795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
DUF7653
DUF3276
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
111781795
NCBI-ProteinID:
XP_023518262
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All DBs
Position
LG19:complement(5578243..5587726)
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AA seq
698 aa
AA seq
DB search
MAIHAFTTTGFSFHLPFPKCTTAYSRSAGDRARTLCCSSGDGDLSGLINVSSESEFGRRG
GAQMAKSSDGKRSIQSSDGELRAKNSEIWQLFREAQRNILSLDKQRALAVEELNKAISEK
KLLLERIEELEIEKQAMARKDQVSLCWELLLRIDSMVLTGTISFGEASQMRQLIMDQKVS
ILDAFTEILQKKDAELLAELRQLSDRKNKNGFHIVHICTEMAPIASFGAVASFVTGLSQA
LQRKGNLVEVILPKYGSMDLNEVQGIRETEVEYYSYYNGQLHGNKIWTGVICGIGVTFIQ
PLYYSSFFNREKAYGYSDDFERFMYFSRAALDYIVKSGKKPDVLHIHNWQTAIIGPLFWD
IFVQQGLEGSRILFTCHDIHSQPLIQPEKLALCGLDPTKLHRPDRLQDNSNTHLANIMKG
GIVYSNKVVIMSSTHSKGHIIHSSSHGLETTLNMHKDKLLVSPCGFESSSWDPEKDKILP
ENYSADDMKGKSVCKIALQQKLRLPENASIITVGCFLSDLSDVDKEDLIAIVKNGTRMAV
QFIFMTTGKMKSGQKELESLQVKIESLQDENIRFINRHDETLSHLIFGGSNIILCQSLHD
PILQVPLKAMRYGAAPIAITSNDNGFRHFPDHDYETTKLAMFINSTFGYLSFSQALDEIN
NNPSEWNHKVFDAMTKDFSWDAECCDIYLSAYTAIKSL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggctatccatgcatttaccacaactggtttctctttccatcttccctttccaaaatgt
accactgcttactcgagatctgctggtgatcgagctcgaactctctgttgctcaagcgga
gatggagatcttagcggcttgattaacgtgtcatcggaatcggagttcggaagacgcggg
ggtgcacagatggcgaagtcatcagatggtaaacgtagcattcagtcgtcagatggagaa
ctacgggcaaaaaacagtgaaatttggcaactcttcagagaagctcagcgaaatatcttg
tccttggataaacaacgtgcccttgctgtagaggagctgaataaagctatcagcgagaaa
aaattactgctagaaaggatcgaggaattggagattgaaaagcaggctatggctagaaaa
gatcaggtatcattatgttgggaattactacttcgaattgattctatggttctcactggc
acgattagttttggagaggcatctcaaatgagacaactgatcatggatcaaaaagtcagc
atacttgatgctttcaccgagatcctgcagaaaaaagatgctgagctactagcagagcta
cgtcaattatctgacagaaaaaataagaatggttttcacatcgttcacatttgtactgaa
atggctccaattgcttcttttggagcagtggcatcatttgtaacagggttatctcaagct
ctacaaagaaagggcaacttggtggaggttatcttaccaaagtatggaagcatggaccta
aatgaggttcaagggatacgagagactgaggtggagtactattcttattataatggtcaa
ctacatggaaacaaaatatggactggggtaatctgtggcataggggttactttcattcaa
cctttgtattactcatcatttttcaaccgggagaaggcatatggatactctgatgatttt
gaacggtttatgtacttttctcgggcagcattggattatattgtgaaatctggcaagaag
cctgatgtgttgcatatacacaattggcagactgctataataggaccgcttttctgggac
atttttgttcaacagggacttgaaggttctagaattctattcacatgtcacgacatccat
tcacagcctcttatacaaccagagaaactggcactatgcggacttgatcctacgaaactt
catcgtcctgatcgtctgcaagacaactccaatacacatcttgcaaacattatgaagggc
ggaattgtttactccaataaagttgtaataatgtcatccacacattcaaaaggccatata
attcatagttcgagtcatggtttggaaactaccttaaacatgcacaaggacaaattgctt
gtctccccttgtgggtttgagagctcatcttgggatcctgaaaaagataaaattcttcca
gaaaattatagtgcagatgatatgaaaggaaaatctgtatgcaaaattgcgttgcagcaa
aagctgagattacctgagaatgcttctattatcaccgttggatgctttttgtcagatttg
tcagatgttgacaaagaggacctgatagcaattgttaagaatggtaccagaatggctgtc
cagttcatcttcatgacgactggcaagatgaaaagtggacaaaaggaactagaatctctt
caagtaaaaattgagtcattgcaggatgaaaacatcaggttcataaacagacacgatgag
acattgtcgcatctcatttttggaggttccaacattatcttgtgccagtctcttcacgat
cctattctgcaagtgccattgaaggctatgagatatggagctgctccaattgcaatcacc
tccaatgacaacggattcagacactttccggatcacgactacgagactactaaattagca
atgttcatcaactctaccttcggatacttgtccttcagccaagccctagatgaaattaat
aacaatccatccgagtggaatcataaagtgtttgatgccatgaccaaggacttctcctgg
gatgcagagtgctgtgatatctatctctctgcttacacagctataaagagcttgtga
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