Cucurbita pepo subsp. pepo (vegetable marrow): 111781892
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Entry
111781892 CDS
T05351
Name
(RefSeq) protein SHI RELATED SEQUENCE 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111781892
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
111781892
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
111781892
NCBI-ProteinID:
XP_023518391
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Position
LG19:complement(6224294..6225800)
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AA seq
288 aa
AA seq
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MSMSGFFTLGSTDQEHQQPDTNRPNQTLPPDTLFWYKPGSVELWQPQQHQQHQQHQQQSL
FQTRSHNNNNNNNLYSDESSSRSGNLMMISSGSGGGGISCQDCGNQAKKDCTHMRCRSCC
NTRGFPCQTHVKSTWVPAAKRRQRQQKLAALQTHPKRHTDYNIPTTNTSGLEIGNFPAEL
NSPAVFRCVRLSSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYVPGETSSGGGGGL
QPLNFIAGAADANAASSAALPLLDPSSLYSAPLNSFMAGTQFFLPPRS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtctggtttcttcactctaggctccaccgaccaagaacaccaacaacccgac
acgaatcgcccaaaccaaacactccccccggacaccttgttttggtacaagcccggaagc
gtcgagctatggcagccccaacagcaccaacagcaccaacagcaccaacaacaatcgcta
tttcaaacgcggtctcacaacaacaacaacaacaataatctgtactcggatgaatcctcg
tccagatccggtaatttaatgatgattagctccggatcaggcggagggggaatcagctgc
caagactgcggcaaccaagccaaaaaagactgtacccatatgcgatgcaggagttgctgc
aacacccgaggcttcccttgccagacccatgtcaaaagcacttgggtccctgccgccaag
cgccgtcagcgccaacaaaaactcgccgccttacaaacccatcccaaacgccacacagat
tataacatccccaccaccaacacttctgggttagaaattgggaatttcccggcggaattg
aactccccggctgtgttccgttgcgttcgtctcagctccaccgacgacaccgacgatcaa
tacgcatatcaaacggcggtgaacatcggaggacatgttttcaagggaattctatacgat
caaggacccgaaaataattatgttcctggtgagacctcgtccggcggcggtggtgggttg
caaccactgaatttcatcgccggtgccgccgatgccaacgctgcttcctccgccgcatta
cccttactcgatccctcttcgttatactcagcgccgctcaatagcttcatggcgggtacg
caattcttcctaccaccaagatcctaa
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