Cucurbita pepo subsp. pepo (vegetable marrow): 111781912
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Entry
111781912 CDS
T05351
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111781912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpep03009
]
111781912
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111781912
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_2
AAA_16
TIP49
AAA_22
AAA_14
RNA_helicase
AAA_33
AAA_28
NPHP3_N
IstB_IS21
AAA_18
Rad17
AAA_17
nSTAND3
Nucleolin_bd
Parvo_NS1
Bac_DnaA
Mg_chelatase
Viral_helicase1
AAA_3
AAA_11
ATPase_2
NACHT
Cytidylate_kin2
TsaE
ABC_tran
NB-ARC
Motif
Other DBs
NCBI-GeneID:
111781912
NCBI-ProteinID:
XP_023518413
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Position
LG19:complement(1005773..1010952)
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AA seq
805 aa
AA seq
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MAGGRSPSVVNRGFLLQRIKSCRHKCPTVDDIVDHLQSTYRDYRGLKKSPFTSIVQQTLD
SQLKKNPKSTPSTSTPSKIKRQFQDSEDEDADCSTIEKKRYKRVDLGEQRLQNESPSSST
SSDSGNSGDGAVATSEDAIYGEKVEPALDLMKSMLQTSYAESNKSKNEHLEKSVELEAAI
ENKVAEKIGVENEGNASKGILRKEGQGSHGGAEMETGEGKEEGPRFKDLGGMKGVLEELK
MEVIVPLYHPQLPMWLGVRPMAGILLHGPPGCGKTKLAHAIANETGVPFYKISAPEIVSG
VSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMERRIVTQLMTCMDGFHK
LVDSTDASSKKDSSNDRPGYVLVIGATNRPDAVDPALRRPGRFDREIVLGVPDENARAEI
LSVLTSTLRLEGSFDLLKIARATPGFVGADLTALANKAGNLAMKRIIDQRKFELSTDFVD
KEHIEDWWKQPWLPEEMEKLAITMTDFEEAIQMIQPSLRREGFSAIPSVKWEDVGGLEQL
RAEFDRYVVRRIKYPDDYEGFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGP
ELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIEL
DGAEQRRGVFVIGATNRPEVMDPAVLRPGRFGKLLYVPLPGPTERGLVLKALGRKKPIDI
SVDLLAVGQMDACENFSGADLSALMNEAAMAALEEKLTSVRNNMESASCTIKMTHFESGL
TKISPSVSEKQKHFYEILSKSLKPA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtggcaggtcgccgtccgttgtgaaccgtggtttccttcttcaacgaattaag
tcttgccgccacaagtgtcccaccgtcgacgacatcgtcgaccatctccagtccacttac
agggactaccgaggactcaagaagtcacctttcacttcaatcgtccaacaaaccctcgat
tcgcagctcaaaaagaatcctaaatccactccttctacttctacgcccagcaaaatcaaa
cgccaatttcaagattctgaagacgaagatgccgattgcagtaccatcgaaaagaagcgg
tacaagagagttgacctcggcgaacagaggttgcagaatgaatcgccttcgtcttcgact
tcttctgattctggtaatagtggcgatggagcagtggcgacgtcggaggatgctatatat
ggggaaaaagtagagccggcgttagatttgatgaagtcgatgctccaaacatcttatgcg
gagtcgaataagtcgaagaatgagcatttggagaagagtgtagagttggaagctgccata
gagaataaggttgctgaaaaaattggtgtggagaatgaagggaatgcaagcaaggggata
ttgagaaaggaggggcagggttctcatggtggggcagaaatggaaacaggggaagggaag
gaggaagggcctaggtttaaggatttgggagggatgaagggtgtgctagaggaattgaag
atggaggtgattgttccgctctaccatccgcagctaccaatgtggttgggcgttcggccg
atggccggaattttacttcatggcccccctggttgtgggaagactaaattggctcatgcc
attgctaatgaaactggtgtgcctttctataagatttcggctcccgagattgtttcgggc
gtatcaggtgcgtctgaagaaaatattagagagctattttcgaaagcctatagaacagca
ccatcaattgtttttattgatgaaattgatgcaattgcatcaaagagagaaaatctacaa
agggagatggagagaaggattgtaacacaattaatgacttgcatggatgggttccacaag
cttgtagattctactgatgcaagttcaaagaaagatagttccaatgatagaccaggttat
gttcttgtaattggtgcaaccaataggccagatgcagttgatcctgcattaaggaggccg
ggtcgttttgatcgtgagattgtattaggtgttccagatgaaaatgcgagggctgaaatt
ctctctgttctaaccagcaccttgagactcgaaggttctttcgatcttctgaaaatagct
agggcaactccgggtttcgttggcgctgatttgacagcattggccaataaggctggtaat
cttgccatgaagagaataattgatcaaagaaaatttgagttgtctactgattttgttgat
aaggaacatatagaagattggtggaagcaaccttggttgcctgaagagatggaaaaattg
gctataactatgaccgactttgaggaagcaattcaaatgatacaaccttcactgagaaga
gaagggttttctgcaattcccagtgtgaagtgggaagatgttggaggcttagaacaacta
agagcagagttcgatcgctatgtagttaggcgtataaaatatccagatgattatgagggc
tttggtgtggatctagagactggatttttgttatatggtcctccaggctgtggtaaaaca
ctaattgctaaagctgttgcaaatgaggctggtgccaatttcattcacattaaggggcct
gagttactaaataaatatgttggtgaaagtgaacttgcagttcggacactatttagtcgg
gcaaggacgtgctcgccctgcattcttttctttgatgaagtggatgctttaacaacaaaa
cgtggtaaagaaggaggatgggtcgtggagcgactattgaaccagttactcatagagttg
gatggagcggaacaacgacgaggcgtctttgttattggtgctacaaatagacctgaagtc
atggatcctgctgtactacgaccaggtagatttggcaaacttctttatgttcctcttcct
ggtccaactgagcgagggttagtcttaaaagctcttggaaggaagaagcctattgatatc
agtgtagatctactggcggtgggacaaatggatgcttgtgaaaatttcagtggtgctgat
ctttctgcattgatgaacgaagctgcaatggctgccttggaagaaaaattgacatcagtc
aggaataatatggaatcagcatcatgtaccatcaagatgacccattttgagagtgggcta
actaagatttctccttctgtgtcagaaaagcaaaaacatttttacgagattttgtcgaag
agcttaaagcccgcttaa
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