Cucurbita pepo subsp. pepo (vegetable marrow): 111782038
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Entry
111782038 CDS
T05351
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111782038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111782038
03110 Chaperones and folding catalysts [BR:
cpep03110
]
111782038
04121 Ubiquitin system [BR:
cpep04121
]
111782038
Enzymes [BR:
cpep01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
111782038
Spliceosome [BR:
cpep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111782038
Complex C
U4/U6.U5 tri-SnRNP related factors
111782038
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
111782038
Chaperones and folding catalysts [BR:
cpep03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
111782038
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
U-box type E3
111782038
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
U-box
Rtf2
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
111782038
NCBI-ProteinID:
XP_023518573
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Position
LG19:complement(5352849..5356979)
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AA seq
593 aa
AA seq
DB search
MGKKQHSKDRLFITKTEWATEWGGAKSKDNQTPFKRLPFYCCALTFTPFEDPVCTADGSI
FEIMNIIPYIRKYGKNPVTGAPLKQEDLIPLIFHKNSEGEFQCPVLNKVFTEFTHIVAIK
TTGNVFCYEAIKELNIKTKNWKELLTDEPFSREDIITIQNPTALDTKVLLDFDHVKKSLK
VDNEELQKMKSDPTYNINVSGDIKQMLKELGTEKGRQTALHGGGGGKAQKERAAALAAIL
EARSRIKENSKENAKGEETPTQAFSIVDAASASVHGRSAAAAKAAPSEKTAARIAMHMAG
ERAPVNAKMVKSRYTTGAASRSFTSTSYDPVTKNEHEYIKVEKNPKKKGYVQLHTTHGDL
NIELHCDITPRACENFITLCENGYYNGVAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFK
DELNSKLLHSGRGIVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTALAAME
KVPVDDNDRPLEEIKITSVTVFVNPYSEPDEEEENKQKDEKNVEDEENDKVGSWYSNPGT
GAAENGAAGGGVGKYLKARNAQSKPPAVDASLGATTSTKKRTAAGEFKDFSSW
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacagcacagtaaagaccgtttgtttattacgaaaactgaatgggccact
gaatggggcggagccaaatccaaggacaatcaaacccctttcaagcggcttcctttttat
tgctgcgcgcttacatttacaccctttgaggaccctgtatgtactgccgatggcagcatc
ttcgagataatgaatatcatcccttatattcggaagtacggtaaaaatcctgttactgga
gctcccctgaagcaggaggatcttattcctctgattttccacaagaactctgaaggtgag
ttccagtgccctgtactaaacaaagtttttaccgagttcactcacatagttgctataaag
accactggaaatgtcttctgctacgaggcaattaaagaactaaatatcaagacaaaaaac
tggaaggaacttctcactgatgaaccatttagtagggaagatattataaccattcagaac
cctactgcacttgatactaaggttctcctggattttgatcatgtgaaaaaaagcctgaaa
gttgataatgaagaacttcagaaaatgaaatcagatccaacatataacataaatgtgtcg
ggggacatcaagcagatgttgaaggaacttggaacagaaaaaggaaggcaaactgcactt
catgggggaggtggtggcaaggcacagaaagaaagggcagctgcccttgctgcaatttta
gaagctaggtcacgcattaaagaaaattccaaggaaaatgcaaaaggagaggagacacct
actcaggcatttagtattgtggatgctgcatctgcttcagtacatggaagaagtgcagct
gctgcgaaagctgctcctagtgaaaaaactgcagctcgaattgccatgcacatggcgggt
gagagggcaccggtgaatgctaagatggtaaagagtcgttacactactggggctgcatcc
cgatcctttacatctacatcttacgatcctgttacaaagaatgaacacgaatatatcaag
gttgagaaaaatccaaagaagaaaggatatgttcagttgcacacaactcatggagatttg
aatattgagctgcattgtgatattactccaagggcatgtgagaatttcatcacactttgt
gaaaatggctactacaatggagtagcttttcatagaagtattaggaattttatgattcaa
ggtggcgatccaactggtactgggagaggaggtgaatctatatggggaaagcccttcaaa
gatgaactcaactccaagttgcttcattctggaaggggaattgtcagtatggcaaatagt
ggtccccacactaatggttcccagttctttattctatacaaatctgccaatcatttaaac
ttcaagcatactgtatttggcggtgttgttggtggtttgactgctttggcagctatggaa
aaggttcctgttgatgacaatgatcggccgctggaggagatcaagattacaagtgtcaca
gtctttgtcaatccatactcggaacccgatgaagaagaagaaaacaagcaaaaagacgag
aagaatgttgaagatgaagaaaacgataaggttggatcatggtatagcaacccaggcacc
ggggcagctgaaaatggagctgcaggtggcggtgtagggaaataccttaaagcaaggaat
gcccaatccaaaccccctgctgttgatgctagtctaggagcaactacctcgaccaagaaa
aggacagctgcaggggagttcaaagacttctcttcgtggtaa
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