Cucurbita pepo subsp. pepo (vegetable marrow): 111782079
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Entry
111782079 CDS
T05351
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04142
Lysosome
cpep04144
Endocytosis
cpep05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111782079
04142 Lysosome
111782079
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111782079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111782079
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111782079
Membrane trafficking [BR:
cpep04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
111782079
Exosome [BR:
cpep04147
]
Exosomal proteins
Proteins found in most exosomes
111782079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
IcmW
Motif
Other DBs
NCBI-GeneID:
111782079
NCBI-ProteinID:
XP_023518633
LinkDB
All DBs
Position
LG01:complement(20601484..20615283)
Genome browser
AA seq
1706 aa
AA seq
DB search
MAAASAPITMKEAITLPSIGINPQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVQGSTQDHLQIFNIEMKAKMKSHLMPEQVVFWKWI
TPKTLGLVTQTSVYHWSIEGDSEPVKVFERTANLVNNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVEQQRSQALEAHAASFAQFKLPGNENPSTLISFATKTLNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAEASSVGGFYAINRRGQVLLATVNEQTIIPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
TGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLADDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIGQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIESAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAYAIFKKFNLNVQAVNVLLDNIQSIERAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLEVIHAAEDANVYHDLVRYLLMVREKAKEPKVDSELIYAYAKIDRLAEI
EEFILMPNVANLQNVGDRLYDEALYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVTVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMKKAGHLLLVKPYMIAVQSNNVSAVNEALNGIYVEEEDYDRLRESTDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRADVALELAWINNMVDFAFPYLLQFIREY
TGKVDELVKDKIEALKEVKAKEQEEKDVIAQQNMYAQLLPLALPAPPMPGMGGGPGMPGY
APAPPMGGMGMPPMPPFGMPPMGSSY
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccagcgctccgatcaccatgaaggaagccataacgcttccgagcattggt
attaatccgcaattcataacattcacgcacgtgacaatggaatccgacaaatatatttgc
gtccgagaaacagcaccgcagaacagtgttgttattattgatatgaacatgccaatgcag
ccgttgaggaggcctattactgcggactcagctcttatgaatcctaattctagaatattg
gccttgaaagctcaagtccagggatcaactcaagaccacctacaaatattcaacattgaa
atgaaggccaagatgaaatcacatttgatgcccgagcaggttgtcttttggaagtggata
acccctaagacactgggcttggtcacacaaacttcagtatatcattggtccattgaaggc
gattctgaacctgtgaaagtgtttgaaagaacagccaatctggtgaacaatcagattata
aactatcggtgtgatccgtctgaaaagtggttggttttgattgggattgcacctggttca
cctgagaggccacaacttgtgaaagggaatatgcaacttttctctgtggagcagcagaga
agtcaagctcttgaagcacatgctgcatcatttgctcaatttaagcttcctggaaatgag
aatccttccactcttatatcctttgccacgaagacacttaacgctggacagatcacttcc
aagttacatgtcattgaacttggtgcccagccaggaaaaccatcatttacaaagaagcaa
gcagatctattctttccacctgattttgctgatgactttcctgtggcaatgcagatctca
cacaaatatagtttgatctatgtgatcaccaagcttgggttgttatttgtatatgacttg
gagacagctgcagcagtatatagaaataggatcagtccagatcctatattcttaactgca
gaggcttcttctgtgggaggattttatgcaataaacaggaggggtcaggtgttactggct
actgtcaatgaacaaacaattatcccctttgtcagtggccagttgaacaatctagagctt
gctgtcaatcttgctaaaagaggaaatcttcctggtgctgaaaatctggttgtccaacgt
ttccaagaactttttgctcaaacaaagtacaaagaagccgctgaattggctgctgagtct
cctcaaggaatcctccgcacaccagatactgttgcaaaatttcagagtgtaccggtgcaa
actggtcaaacaccacccctactgcagtattttggaacgttattaacaagaggaaagctg
aatgcatttgagtcattggaactgtctcgtttagttgtaaaccagaacaagaagaacctc
ctggagaattggttggctgatgacaagttggaatgcagtgaggaattgggggatcttgtt
aagactgtggataatgacttggccttgaaaatctatataaaagccagagcaacgccaaag
gttgttgctgcctttgctgagcggagggaatttgataagatccttatatattcaaagcag
gttggatacacgccagactatttattccttttgcaaacaattctccgaacggatcctcag
ggagcggttaactttgcactgatgatgtcacaaatggaaggaggttgtcctgttgactac
aacacaataactgatctgtttcttcagaggaatttgatccgtgaggctactgctttcctg
ttagacgttttgaagccaaatctacctgagcatgctttcctccagaccaaggtcctggaa
atcaatctggtaacttttccaaatgtagctgacgccatattggccaatggaatgtttagt
cattatgatagacctcgaattggacaactttgtgaaaaggctgggctttatgtgcgagcg
ttgcagcattatacagagttaccagatattaaacgagtcattgtgaacacacatgctatt
gagccacagtcacttgtggagtttttcggtaccttgtctcgtgagtgggctttggagtgc
atgaaggaccttttgcttgtcaatctcagaggcaaccttcagattattgtgcaggttgca
aaggaatattgtgaacagttgggggttgatgcgtgcataaagctttttgaacaattcaag
tcatatgagggcttgtactttttcttggggtcatatttgagttcgagtgaggatcctgac
attcacttcaaatacatcgagtctgctgcaaaaactggacaaattaaggaggttgaacgt
gtaacaagagaatcaaatttctatgatgcagagaaaacaaagaactttttgatggaagct
aagcttcctgatgcacgtcctctaatcaatgtttgtgatcggtttggatttgttccagat
ctcacacattacctgtacacaaataacatgctccgttacattgaaggctacgttcaaaag
gtgaaccctgggaatgctcctctagttgtgggccagctactggatgacgagtgtcctgaa
gatttcatcaaaggtttgattctctcagttcgttctttgcttcccgtggagcctctagtg
gatgaatgtgaaaagagaaaccggttgcggttgcttactcaatttttggagcatctggtg
agcgaaggaagtcaggatgtacatgtacataatgctctgggtaaaattattattgatagc
aacaataacccagagcacttcctcaccaccaatccgtactacgattcccgtgttgtgggt
aaatattgtgaaaaacgtgatcccactttagctgttgtggcttatcgacgtgggcagtgt
gatgatgagcttattaatgttacaaacaaaaattctttgttcaaactgcaagcaagatat
gtggttgagagaatggatggtgatctttgggagaaggttcttaaccctgaaaatgaatat
agaagacagctcattgatcaagttgtatcgacagccttgccagaaagcaagagtccggag
caagtttcagctgctgtcaaggcttttatgacagcagatctgccacacgaattgattgaa
cttcttgaaaagattgtccttcaaaactctgcgttcagtggaaactttaatctgcaaaat
ctccttatattgacagccatcaaggcagatccttccagagttatggattacattaacaga
ctggataattttgatggacctgcagttggtgaagtggccgttgaggcacaactatatgaa
gaggcatatgccattttcaagaagttcaacttgaatgttcaagctgttaatgtgctgttg
gataacattcaaagtattgaaagagctgtggaatttgcattccgggtagaagaagatgca
gtttggagccaggtggcaaaggctcaattgagggaaggattggtgagtgatgctattgag
tcatttatccgtgcagatgatgccacgcaatttctggaagtcattcatgctgctgaggat
gcaaatgtgtaccatgacctagttaggtacctgttgatggttagggagaaggccaaagag
ccgaaggtggacagtgagctgatatatgcctatgctaaaattgatcggttggctgagatc
gaagaatttattctcatgccaaatgtggctaatcttcaaaatgttggcgatcgcttgtat
gatgaagccttatatgaggctgctaaaattatatttgccttcatatctaactgggccaag
ctggctgtcactcttgtaaaactgaaacagttccaaggtgctgttgatgcagcacgaaaa
gcaaacagtgcaaagacatggaaggaagtgtgctttgcttgtgttgatgctgaagaattc
cgcttggcacagatatgtggtcttaacattattatccaggtggatgatctggaggaagtc
agtgaatattatcagaatagaggatgcttcaatgaattgatctctctaatggagagtgga
ttggggcttgaacgtgctcatatgggtatcttcactgagttgggagttctgtatgccaga
taccgtcatgagaagcttatggagcacatcaaactcttctcaacccggctgaatattcct
aagcttatacgagcttgtgatgaacagcagcattggaaggaactcacctatttgtatatc
cagtatgatgaatttgataatgctgctactaccatcatgaatcattctcccgaagcatgg
gatcacatgcaatttaaagatgtgacagtcaaagttgctaatgtggaattgtattacaag
gctgtgcatttttacttgcaagagcatcctgatcttattaatgatcttctcaacgtcctt
gcacttcgtgtagaccacacacgagttgttgatattatgaagaaggctggtcacttgctg
ctagtgaagccatacatgattgcagttcagagcaacaatgtgtctgctgtgaatgaggcc
ttaaatggaatttacgttgaagaggaagactatgacagattgcgtgaatcaactgatttg
cacgataattttgatcaaataggccttgcacagaagattgagaagcatgagttacttgaa
atgagacgcgttgctgcctacatatacaaaaaagcaggaagatggaagcaatctattgcc
ttgtcaaagaaagacaatctctacaaggatgcaatggagacagcatcgcaatctggtgac
cgtgaacttgctgaggagttgcttgtttacttcattgagcagggaaagaaggaatgcttt
gcttcatgcctctttgtttgttatgacttaattcgagcagatgttgctcttgaacttgcc
tggatcaacaacatggtcgactttgctttcccatacctgttgcagtttatccgagaatat
acaggaaaggttgatgaacttgtgaaggacaagattgaggctcttaaagaggtcaaggca
aaggagcaggaagagaaggacgttattgctcagcagaacatgtatgctcagttgctgcct
cttgctttgcctgcaccgccaatgccgggtatgggaggaggaccaggaatgccaggttat
gcacccgcaccacccatgggtgggatgggaatgcctccaatgccacctttcggaatgcca
ccaatgggtagcagctattaa
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integrated database retrieval system
