Cucurbita pepo subsp. pepo (vegetable marrow): 111782082
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Entry
111782082 CDS
T05351
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111782082
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpep01009
]
111782082
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111782082
Protein phosphatases and associated proteins [BR:
cpep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111782082
Spliceosome [BR:
cpep03041
]
Common components
Common spliceosomal components
SR proteins
111782082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
111782082
NCBI-ProteinID:
XP_023518632
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All DBs
Position
LG19:6475197..6477898
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AA seq
179 aa
AA seq
DB search
MENALNPGNTLYVTGLSARVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVQMDNV
DDANRRVKHLNQSILEGRYITVEKSRRKRPRTLTPGHYLGLKNTRDSGYRDDRGRYRGGS
LRDDYGYRRSPRRSPYQGPREYSPRYSSPYGGRSRRDHSRSPPYSPYGSPDRRYPHGSR
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgcccttaaccctgggaatacgctttatgtcaccggtctatctgcgagggtc
actgaaagagaccttgaagaacacttttccaaggagggcaaggtagcttcttgtttcctt
gtggtggaaccacgaacacgaatttcccggggttttgcatttgtccagatggacaatgtt
gatgatgctaatcggcgtgttaagcatctcaaccagtcaattctagaaggtcgatatata
actgtggagaagtcacggaggaaacggccaagaactctaacgcctggacactatttgggg
ttgaaaaacaccagagactctggctaccgtgatgatcgaggaaggtaccgtggtggctct
cttcgtgatgactatggttatcgtcggtctccaagacgctcaccatatcaggggcctcga
gagtactcccctcgatattcctccccttatggtggaagatcaaggagggatcactccagg
tcgcctccttactccccgtatggcagcccggataggaggtatcctcatggctccaggtga
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