Cucurbita pepo subsp. pepo (vegetable marrow): 111782116
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Entry
111782116 CDS
T05351
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpep01009
]
111782116
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111782116
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111782116
Protein phosphatases and associated proteins [BR:
cpep01009
]
HAD phosphatases
Fcp/Scp phosphatases
111782116
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111782116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
Glyco_transf_92
Motif
Other DBs
NCBI-GeneID:
111782116
NCBI-ProteinID:
XP_023518681
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All DBs
Position
LG19:7045546..7052804
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AA seq
798 aa
AA seq
DB search
MYKSVVYQGDELLGEVEIYPEEKNGYKNIEVKEIRINHFSQPSERCPPLAVLHTIAASGI
CFKMESKTSQSQDMPLYQLHSSCIMENKTAIMMFGAEELHLVAMYSRDHDKQYPCFWGFI
VAIGLYNSCLIMLNLRCLGIVFDLDETLVVANTMRSFEDRIEALQRKISTELDQQRASGM
QAEVKRYQDDKLILKQYAENDQIIENGKVIKSQSEVVPALSGNHQPIVRPILRLYEKNII
LTRINPQIRDTSVLVKLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDS
NLINPKELLDRIVCVKSGSRKSLFNVFQDGFCHPKMALVIDDRLKVWDEKDQPRVHVVPA
FAPYYAPNAEGNNAVPVLCVARNVACNVRGGFFKEFDEILLQKISDISYEDDANDIPSPP
DVSNYLVSEDEYSVSNGNKDMLTFDGMPDMDVERRLKDAFLASSTINSADPRVSSLQYTM
PSASGAVPPPPKQVSLPYFPDMQLPHVNSVAPTEPSIQCSPAREEGEVPESELDPDTRRR
LLILQHGQDIRERPPSEPAFSVRPPPLQQVAGPRVQSRGSWSPMEEEMSPRQLNRSARKE
FPVDAEPMREKHRSNHSSFFPKIDGSIPPDRIPHENQRLSKEAFYRDDRARLSRRPSNYP
AFSGEEVPMNQSSSRSRDNDVESGCSIWSETPVGALQEIAMKFGTKVEFKSALVSSADLQ
FSVEAWFVGEKIGEGIGKTRREAQRHAAEGSIKNLANIYVSRCKADSTSANDINKFPSDN
GSGKRMKLDFHGHLPKTK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtataagtcggtggtttaccaaggggatgagctactgggagaggtagagatttaccca
gaagaaaagaatggctacaagaacatcgaagtgaaggaaatcagaataaatcacttctcg
caaccgagtgagaggtgcccaccacttgcagtgcttcataccattgcagcctctggaatt
tgcttcaaaatggagtcaaagacctcgcagtcacaggacatgccgctctatcaattgcat
tcctcgtgtatcatggagaataagactgctataatgatgtttggagcagaggagctccat
ttggtagccatgtattctagagatcatgacaagcagtatccatgtttctggggtttcatt
gttgcaattggactttacaattcttgtctcatcatgttgaatcttagatgtcttggcatt
gtatttgatcttgatgagacacttgtggttgcaaatacaatgcgctcatttgaggataga
attgaagccctgcagcggaaaataagcactgagctggatcaacagcgtgcttcaggcatg
caggcagaggttaaacgatatcaagatgacaagttaattctgaagcaatatgcagaaaat
gaccagattattgagaatggaaaagtgattaaaagtcaatcagaggttgttccagcattg
tctggcaatcatcaacctattgttcgaccaatattacgattgtatgaaaagaatattata
ctgactcgtatcaacccccagatacgtgatacaagtgttctcgtcaagttaagacctgcc
tgggaagatcttcggagctacttgactgcaagaggtcgcaagcgttttgaggtctatgtg
tgtacaatggctgaaagggattatgctttggagatgtggaggcttcttgatccagattca
aatttgataaatcctaaggaattgttggatcgcattgtttgcgtcaagtctggttctaga
aagtctttgttcaacgtcttccaagatgggttttgccacccaaagatggctctagtaatt
gatgatcgtttgaaagtgtgggatgaaaaggatcaacctcgagtgcatgtcgtgcctgca
tttgctccttactatgcccctaatgctgaaggaaacaatgctgtccctgttttatgcgtg
gcaagaaacgttgcgtgcaatgttagaggtggttttttcaaggaatttgatgagatcctt
ctgcaaaaaatttctgatatctcatatgaagatgatgcaaatgatattccgtctcctcct
gatgtgagcaactatcttgtttcagaggatgaatactctgtttctaatggaaacaaagat
atgctcacttttgatggcatgccagacatggacgttgaaagaagactgaaggacgcattt
ttggcttcttcaactatcaacagtgcagatccacgagtgtcttctcttcaatacacaatg
ccttctgcttctggcgctgttccacctcctccaaaacaggtgtctctgccatattttcca
gacatgcagcttccccatgtcaactcggtggcccccactgaaccaagtatacaatgctct
ccagctagagaggagggtgaagtaccagaatctgaactagatcctgatacaaggcggagg
ctccttatattgcaacatgggcaagatataagagagcgcccacctagtgaacctgcattt
tcagtgcggccccctccattacagcaggttgctggtccacgtgtacaatcacgtggaagt
tggtctccaatggaagaagaaatgagcccaaggcaactaaatcggtctgcacgcaaagag
ttccctgtagatgccgaaccgatgcgggagaagcataggtccaatcattcttcatttttc
cccaagattgatggttccattccacctgatagaattcctcatgaaaatcagagattgtca
aaagaagctttttatagagatgatcgtgcaagattaagtcgtaggccatctaattatcct
gctttctcaggtgaggaggttccgatgaatcaatcatcttcaagaagtcgagataatgac
gttgaatctggatgctccatctggagtgaaactcctgttggagctctacaggaaattgca
atgaagtttggcaccaaggtggaatttaagtcggcgttggtttccagtgcagatctacag
ttttctgtcgaggcgtggtttgtgggtgagaaaattggagaaggaattggtaaaacaaga
agggaagctcagcgacatgctgctgaaggttctataaagaatttggccaacatttacgta
tcgcgttgtaaggctgactctacatctgcaaatgatataaacaagtttcccagtgataac
ggatcgggaaaacgaatgaagctggacttccacggccatcttccaaaaactaaataa
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