KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111782461
Entry
111782461         CDS       T05351                                 
Name
(RefSeq) DNA repair protein RAD5A
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111782461
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    111782461
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 DEAD Prok-RING_4 ResIII RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_5 zf-RING_4 UBA_Rad5 zf-ANAPC11
Other DBs
NCBI-GeneID: 111782461
NCBI-ProteinID: XP_023518978
LinkDB
Position
LG20:complement(5965646..5976222)
AA seq 1037 aa
MGSKINDELVSTVRSIVGPDFSYMDVIRALHLAKNDVTAAINIIYDTPSFGMRDKPHVHE
NCDDVHVRCVSSSESKAVASTPKRVCDEGADFPSHEQESSTRSPCNVGVKNAVMETSSPC
SSSIGSEWWLVGWAEVAGLSTSKGRKVKPGDEVVFTFPSRNGCKTPSSAKVSGKGKLMAN
CSEIVRFSTKDSGEIGRIPNEWARCLLPLVSDKKVRIEGWCKSAPEVLALMDTILLSVSV
YINSSLLRKHQQTSLKAASSAAAESVIHPLPTLFRLLGLTSFKKAEFTPEDLSGRKQLLD
SKVSYSLPSSLARTLKKCSQNDNGTENEESISDIDLENIVGAGNTSELEEMDPPSALLCE
LRPYQKQALHWMIHLEKGKCMDEAATTLHPCWEAYRLLDKRELVIYLNAFSGEATTEFPS
TLQIARGGILADAMGLGKTIMTISLLLAHSERGGVSNSQLTCSSVEGDDGSMDQSLNPLK
KAKITGFEKLQKRNTLASGGNLIICPMSLLGQWKAEIEAHVRPGSLSLYVHYGQTRSKDA
RGLAQNDVVVTTYGVLASEFSAQNAEEGGLYSVRWFRVVLDEAHTIKSSKSQVSLAATAL
AADRRWCLTGTPIQNNLEDIFSLLRFLRIEPWGNWAWWNKIIQKPFEEGDERGLKLVQSI
LKPIMLRRTKYSKDREGRPILVLPPADVQVMYCELTDAEKDFYEALFKRSKVKFDQFVEQ
GRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLKSTPNTQVGEGRD
LPSHAYVQKVMEELRSGEHGECPICLEVFEDAVLTPCAHRMCRECLLTSWRSSCSGLCPV
CRKAINRQDLVTAPTENRFQIDIEKNWVESSKVVALMNELETIRLSGSKSILFSQWTAFL
DLLQVPLSRSNIPFLRLDGTLSQQQREKVLKEFSEDNGILVLLMSLKAGGVGINLTAASN
AFVLDPWWNPAVEEQAVMRIHRIGQTKSVKIRRFIVKGTVEERMEAVQARKQRLISGALT
DQEVRSARIEELKMLFT
NT seq 3114 nt   +upstreamnt  +downstreamnt
atggggagcaagatcaacgacgaactcgtatccacagtacggtccatcgttggtcccgac
ttctcctatatggatgttatcagagctcttcacttggccaaaaacgacgtcaccgccgcc
attaatataatctatgatacccctagttttggaatgagggataaaccgcatgttcatgag
aattgtgatgatgttcatgttcgttgtgtctcgagttctgagagcaaggctgttgcctct
acgccgaagcgggtttgtgatgaaggcgcagatttcccgtcgcatgagcaggaaagttct
actcggagtccgtgtaatgttggggtcaagaacgccgttatggaaacctccagtccgtgt
tcgagttcgattgggagtgagtggtggctcgttggctgggctgaagtggctgggctgtct
acgtctaagggaaggaaggtgaagcctggtgacgaagtggtgttcacatttccttcaaga
aatgggtgtaaaacgccttcatcggctaaggtttccgggaagggaaagctcatggccaat
tgttcggagatcgtgaggttttctacaaaagattcaggggagattggtcgaatacccaat
gaatgggctcgatgccttcttccattagtgagtgataaaaaggtaaggatagagggttgg
tgcaaatctgctccagaagtgctggccttaatggatacaattcttttatctgtaagtgta
tacattaacagttctttgcttcgtaagcaccagcaaacctctctcaaggcagctagtagt
gcagctgcagagtcagttattcatcctctcccaactttgtttcggcttcttggtttaaca
tctttcaagaaggctgagtttactccagaggacttgagtggaagaaaacaactgttggac
tcaaaggttagttatagtctgccatcctcactagcgcgtaccttgaagaagtgttctcaa
aatgataatgggactgaaaatgaagagtctatctcagatatcgatcttgagaatattgtt
ggcgctgggaacacttcagagctggaggaaatggatccacctagtgctctgctatgtgaa
cttcggccctaccaaaagcaggctcttcattggatgatccatctggagaaaggaaagtgc
atggatgaggctgcaacaacccttcatccatgttgggaagcttatcgtctattagacaag
agggagcttgtcatctatttaaatgctttttctggtgaagcaacgacagagttcccaagc
actcttcaaattgccagaggagggattctggctgatgccatgggccttgggaagaccatc
atgaccatatcccttcttcttgcccattcagaaagaggtggagtatccaatagtcagctg
acatgttcctcagttgaaggagatgatggaagtatggaccaatctttgaatcctttgaag
aaggctaaaattacaggttttgagaagttgcagaagaggaacaccttagcaagcggcggc
aatctgattatttgtcccatgtcccttctaggacaatggaaggcagagattgaagctcat
gtgcgacctggatctctgtctctgtatgttcattatgggcaaactagatccaaggatgct
agagggttggcacaaaatgatgttgtagtcactacctatggggttttagcctcggaattt
tctgcacagaatgctgaagaaggtggactttattcagttaggtggttcagagtggttctt
gacgaggctcacactattaagtcctctaaaagccaagtatcccttgctgctactgcatta
gctgctgaccgtcgctggtgtcttactggtactcctatccagaacaacctggaggatatc
ttcagtcttcttcgatttttgcggattgaaccttggggaaattgggcatggtggaataaa
atcattcaaaaaccatttgaggaaggtgatgagagagggctaaaattggtccaatccatc
ttaaagcctatcatgcttaggaggactaaatatagtaaggatcgagaaggcaggccaatt
ttagtgcttcctccagctgatgttcaggtgatgtactgtgaacttacagatgctgaaaaa
gatttctatgaggcactcttcaagagatccaaggtgaaatttgaccaatttgttgagcaa
ggacgtgtccttcacaattatgcatcgatattggagttactcttacgtcttcgccaatgt
tgtgatcatccctttcttgtgatgagtcgaggtgatacccaagaatattctgatctaaat
aagctagcaaagcgttttcttaaaagcactccaaacacacaggtaggagaaggtagagat
ctgccttctcatgcttatgtccaaaaagttatggaagagcttcgaagcggtgaacatgga
gaatgtccaatatgtcttgaagtatttgaagatgcagtattgacaccatgtgctcaccgt
atgtgccgggagtgccttttgacaagttggagaagctcttgttctggtttgtgtccagtt
tgtaggaaagcaatcaatagacaggatcttgtaaccgctccaactgagaatcgttttcag
attgatattgagaaaaattgggtggaatcatccaaagttgtggctctgatgaatgaactt
gaaactattcgtttgtcagggtcaaagagtattttattcagccagtggactgcctttctt
gatcttttacaagttcctctctcacggagtaatattccttttctccgtttggatgggact
ttaagtcaacagcagagagaaaaagtactaaaagagttttcagaggataatggaattctg
gtgttgttgatgtcacttaaggctggtggagttggaataaatttgacagctgcttcaaat
gccttcgtattggacccatggtggaatccagcagttgaagaacaagcagttatgcgcatt
catcgcatcgggcaaactaagagtgtgaagataagacgttttatcgtgaagggtactgtg
gaggaaagaatggaggcagtgcaagcaagaaaacagcgattaatttccggtgccttaaca
gatcaagaagttcgaagtgcaagaattgaagaattaaagatgctttttacttga

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