Cucurbita pepo subsp. pepo (vegetable marrow): 111782654
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Entry
111782654 CDS
T05351
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111782654
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
111782654
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_22
AAA_16
nSTAND3
NACHT
AAA_14
AAA_18
Cytidylate_kin
Viral_helicase1
AAA_28
ATPase_2
NPHP3_N
RNA_helicase
AAA_17
AAA_5
AAA_30
DUF815
KAP_NTPase
AAA_33
ABC_tran
TIP49
AAA_11
SLFN-g3_helicase
RuvB_N
TsaE
AAA_2
AAA_7
bpMoxR
AAA_24
Cytidylate_kin2
Rad17
ResIII
nSTAND1
AAA_19
IstB_IS21
PduV-EutP
SRPRB
Mg_chelatase
DUF6939
AAA_3
NB-ARC
NTPase_1
Motif
Other DBs
NCBI-GeneID:
111782654
NCBI-ProteinID:
XP_023519215
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Position
LG20:1480380..1484730
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AA seq
456 aa
AA seq
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MSAPMEISLPNPPLDAQVPESNGIVSESTASSIVNEDKILVSVEVCLKSSSTARIEDVRM
AVERMLEKRSLSYVDGPIPVPLDDAFLAENVQGIRICDSDDGVQNHDILLFWQVKPVVHV
FQLSEEGPCEELGGEGQISSFNEWILPAKEFDGIWESLIFESGLKQRLLRYAASALLFTE
KGVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRYLSRYPHSVLIEVNAHSLFSKW
FSESGKLVAKLFQKIQEMIEEEDNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALL
TQIDKLKSSPNVVILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELLRT
GILTTVEGFDHSMLPNYAGLKEKISIRETKKVDVPLHICKLLLEVAEACEGTSGRFLRKL
PFLAHATLANPCTGDPSKFLFAMLETAVRDRAELPE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctcctatggagatttctctgccaaaccctcccttggatgcgcaggtgcctgaa
tcaaatggcatcgtctccgagtcaactgcttcttctattgtaaatgaagacaaaattctc
gtttcagtcgaggtgtgtttgaaatcctccagcacagcacggattgaagatgtccggatg
gctgttgagagaatgcttgagaagagaagtttaagctatgttgatgggcccattccagtg
ccgctcgatgacgcttttctcgcggaaaacgtgcaaggaatccgaatttgcgactctgac
gacggtgtgcaaaaccatgatatcctcttattctggcaagtcaaacctgtcgttcatgtc
tttcagctaagtgaagaaggaccctgcgaggaacttggtggggaaggacagatttctagt
tttaatgaatggatacttcctgccaaggagtttgacggcatctgggaaagtttaattttt
gagtctggtctcaagcaaagacttctgcgatatgctgctagtgctttgttattcacagag
aagggtgtcgatccattcctagtgtcatggaatcggattgtcctattacatggacctcca
gggactggtaagacgtctttatgcaaagcactggctcaaaaactgtcgataagatatctg
tcaagatatccacacagcgtactaattgaagttaatgcacattcactgttcagcaaatgg
ttttctgaaagtggcaagctggttgcaaagctattccagaagattcaagagatgatagag
gaagaagacaatctggtatttgttttgattgatgaagtggaaagcttagctgctgctaga
aaggctgctttgtctggttcagaaccttcagattccattagggttgtcaatgcgctactt
acacagatagacaagttgaaatcgtcaccaaatgtggtgattctgacaacttccaatata
acagctgctattgatattgcatttgtagaccgtgcagatatcaaagcatatgtaggtcca
ccaactcttcaagcacgttatgaaattctaaggtcctgcttgcaagagcttctacgcact
ggaattttgacaacggttgagggttttgaccactctatgcttcctaactatgctggtttg
aaagagaaaataagcattcgagagaccaagaaggttgatgtaccacttcacatctgcaaa
ctattgctcgaggttgctgaagcatgcgagggtactagtggacgttttttaagaaaactc
ccgttcttagctcatgcgactctagccaatccatgtactggcgacccttcaaagttcttg
ttcgccatgttggaaacggctgtgagagaccgagcagagttacccgaatga
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