Cucurbita pepo subsp. pepo (vegetable marrow): 111782664
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Entry
111782664 CDS
T05351
Name
(RefSeq) probable pectate lyase 22
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111782664
Enzymes [BR:
cpep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111782664
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111782664
NCBI-ProteinID:
XP_023519230
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Position
LG20:1918067..1919647
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AA seq
411 aa
AA seq
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MALPTVVLSLLSLFFLSVSLSAALSASPAAVPNPELVVEEVHRSIINATKRRNLGYLSCG
TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDAGDDDPVNPKPGTL
RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWNWRSVGD
LMVNGAFFTASGAESSSSYARASSLGARPSSLVGTITTNAGALSCRKGSRC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcactgccaacagtcgttctctctctcctctccctctttttcctctccgtctctctc
tccgccgctctctccgcctcccctgccgctgtacccaacccggaactcgtcgtagaagaa
gtacacagatccataatcaatgcgacgaagaggagaaatttggggtatctctcatgtggg
accggaaatcccatcgacgattgctggcggtgcgacccgaattgggagaaaaatcgtcag
agactagctgactgtggaatcggcttcggcaaaaacgccatcggcggtcgtgacggccaa
atctacgtcgtcaccgacgccggcgacgatgaccctgttaaccccaaaccaggaactctc
cgttacgccgtaatccaagacgaacccctctggatcatcttcgctcgcgacatggtcatt
cgattaaaagaggaactaatcatgaactccttcaaaaccatcgacggccgtggtgcgagc
gtccacatcgccggcggcccctgcattacgattcaatacgtaacaaacatcataatccac
ggtctcaacattcacgactgtaaaccagggggaaacaccgacgttcgagattcccctcgg
catttcggattcagaaccatatcggacggcgacggcgtttcaattttcggtggtagccat
gtttgggtcgatcattgctctttatcaaactgtaacgatggtttaatcgacgcgattcat
gggtccacagccatcacgatttcaaacaattacatgacgcatcacgataaagtgatgcta
ttaggccacagcgattcgtacacacaagacaagaatatgcaagtcaccatagctttcaat
cacttcggcgaagggcttgttcaaagaatgcccagatgccgacatgggtacttccatgta
gtgaacaatgactacacgcattgggaaatgtacgccatcggaggtagcgccgcgccgacc
atcaacagtcaggggaacagattcgttgcacccaatgacagattcagcaaagaagtgacg
aaatacgaggatgcaccggagagtgaatggaagaattggaactggcggtcggttggggat
ctgatggtaaacggtgcgtttttcacagcctccggcgccgaatcgtcgtccagctacgcc
agagcgtcgagcttaggggcgcggccgtcgtctctggtcggaacaatcacgacgaatgcg
ggtgcactgagctgcagaaagggctcccgctgctga
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