Cucurbita pepo subsp. pepo (vegetable marrow): 111782778
Help
Entry
111782778 CDS
T05351
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111782778
03036 Chromosome and associated proteins [BR:
cpep03036
]
111782778
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111782778
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111782778
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111782778
microRNA pathway
RISC loading complex
111782778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
111782778
NCBI-ProteinID:
XP_023519350
LinkDB
All DBs
Position
LG20:188519..195716
Genome browser
AA seq
1053 aa
AA seq
DB search
MGRKKKTDGGGESSESQDVGGRGSQRSAERRDGPQQHGGSGYHGGRGWASQGGRGGQGGG
RGRGTSQHQHYGGPPDYQGRGRGGPYQHGGRGNYGGNRSGIGGGSSSGGPSRPPVPELHQ
ATPVYQGGVTQPMSSLASSSSHPPDTSSIDQQFQQISIQQESSQSQAIQPAPPSSKSMRF
PLRPGMGSSGIRCIVKANHFFAELPDKDLHQYDVTITPEVTSRVYNRAVMQQLVNLYRVS
HLGNRLPAYDGRKSLYTAGPLPFISNEFRITLFDEEDGSGGQRQEREFKVVIKLAARADL
HHLGLFLQGRQADAPQEALQVLDIVLRELPTSRYCPVGRSFYSPDLGRRQTMGEGLESWR
GFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSSRPLSDADRVKIKKALR
GVKVEVTHRGNMRRKYRITGLTSQATRELTFPVDERGTMKSVVEYFYETYGFVIQHTQWP
CLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPKDREEDIMRTVRHN
AYHDDPYAQEFGINISARLASVEARILPAPWLKYHETGREKDCLPQVGQWNMMNKKMFNG
GTVNNWMCINFSRYVQDSVTRGFCYELAQMCYISGMAFNPEPVIPPIFARPDHVEKALKT
RYHDAMSILQPQGKELDLLIVVLPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQ
YLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVV
ASQDWPEVTKYAGLVSAQAHRQELIQDLFKTWQDPVRGTVTGGMVKELLISFRRATGQKP
QRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHS
DRHAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADRL
QTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSISSDAAAGRGGGG
GGGGRSTRAPGLNAAVRPLPALKENVKRVMFYC
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagaagaaaactgacggtggtggtgaaagttctgagtctcaggatgttggt
ggtcgtggctcccaacgatcagctgaaaggagagatggtccacagcaacacggtggcagt
ggatatcatggtggaagaggttgggcttctcaagggggacggggaggtcaaggtggtggt
cgtggccgaggaacatctcaacatcagcactacggaggacctccggattaccaaggcagg
ggtagaggtgggccatatcagcatggaggacgcggtaactatggtggtaatcgcagtggc
attgggggaggatcttcttctggtggaccatccaggccaccagttcccgagctgcaccaa
gcaaccccagtgtatcaaggtggggtgactcagccaatgtcatctctggcgagttcttcc
tcccacccacccgatacatcatcaattgatcaacaatttcaacaaatttccatccagcag
gaatcttctcaaagccaagcaattcaacctgcaccaccatctagtaaatctatgagattc
cctttgagaccaggaatgggtagctctggcataaggtgtattgttaaggctaaccacttc
tttgctgagctgccggacaaagatcttcatcagtatgatgttactatcactccagaagtc
acttcacgtgtctataatcgagctgtaatgcaacagctagtgaacttatacagggtctct
caccttggtaatcgtcttccagcctatgatggaaggaaaagtttatacacagctggtcct
cttcctttcatttcaaatgagtttagaatcactctttttgatgaagaggatggatcagga
ggacaaagacaggaaagagaatttaaagttgtgatcaaattggctgctcgtgctgatttg
caccatttagggctctttctgcagggcagacaggcggatgccccacaggaagcccttcaa
gttctggatattgtattgcgcgaattgcctacttcaaggtattgtccagtgggccgatca
ttttattctcctgaccttggcagacgtcagacaatgggtgaggggctggaaagctggcgg
ggcttttatcagagtatccgtcctactcaaatgggcctctctctaaatattgatatgtca
tctactgctttcatagaacctttgcctgtcattgattttgtgactcagcttctcaaccgt
gatgtgtcatcgagaccattatctgacgctgaccgtgtgaagataaagaaggctcttcga
ggtgttaaagttgaagtgacacaccgtggtaatatgcgcagaaaatatcgcataactggt
ttgacatcacaagcaacacgagagctaactttcccggttgatgaaagaggtactatgaaa
tcagtggtcgagtacttctatgaaacatatgggtttgttatacaacatactcagtggcct
tgtcttcaagtagggaaccagcagagacctaactatcttcccatggaagtttgtaagatt
gttgaaggccagaggtattccaaaaggctcaatgaaagacagataactgctctgctcaag
gttacatgccaacgaccaaaagatagagaggaagacattatgcggacggtacgtcataat
gcatatcatgacgatccatatgcacaggagtttggaattaatataagtgctaggcttgcg
tctgttgaagctcgtattcttcctgcaccatggctaaaatatcatgagaccggcagagaa
aaggattgcttgccacaggttggacagtggaatatgatgaataagaaaatgttcaatggt
ggtactgtaaacaactggatgtgcataaatttctctcgatatgtgcaagacagcgttact
cgtggattttgttatgaacttgctcaaatgtgttacatttctggcatggctttcaatcca
gaaccagtgattcctcctatttttgctcgtcctgatcatgtggaaaaggcccttaaaact
cggtaccatgatgcaatgagcattctccaaccccagggcaaggagcttgatctgcttatt
gttgttttgccagataacaacggatctctttatggtgatttaaaacgaatctgtgaaacg
gatcttggcctcgtttcccagtgctgtttgactaaacatgtcttcaaaatgagtaaacag
tatttggccaatgtggccttgaaaataaacgtaaaggttgggggaagaaatacagtactt
gttgatgcattatctaggcgcatacccttggttagtgaccgccctaccattatatttggt
gccgatgtaactcatcctcacccaggagaagactcaagtccatccattgctgctgttgtg
gcttctcaagattggccggaagttacaaaatatgctggtttggtcagtgctcaagcccat
aggcaagagcttatccaagatcttttcaaaacatggcaggatcctgttagggggactgta
acgggtggaatggtcaaggaactcctcatctccttccgtagagccactggacagaaacct
cagcgcattatattttacagggatggggttagcgaaggacagttttaccaagttttattg
catgagctggatgcaattcgaaaggcatgcgcttctctagaaccaaactaccaacctcca
gtgactttcgttgttgtacagaagcgtcatcacactaggttatttgctaataaccattct
gatcgccacgctgttgacaagagtgggaacatattgcctggtacggtcgttgactccaaa
atttgtcaccctacggaatttgacttttacctgtgcagtcatgctggaatccagggtaca
agtcgtccagctcactaccatgttctgtgggatgagaacaagttcacagctgacagattg
cagactctaaccaataatctttgttatacgtatgcaaggtgtactcgctctgtttctatt
gtgcccccagcctactacgctcatcttgctgcattccgagctcgtttctatatggaaccc
gagacttctgatagcgggtcaattagcagtgatgctgctgctggacgtggtggtggtggt
ggtggtggtggtcgcagcacacgggcaccagggttgaatgctgctgttcgacctttgcca
gctctcaaagagaatgttaagagggttatgttctattgttga
DBGET
integrated database retrieval system
