Cucurbita pepo subsp. pepo (vegetable marrow): 111782949
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Entry
111782949 CDS
T05351
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111782949
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111782949
Ion channels [BR:
cpep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111782949
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
TMEM95
DUF6525
Motif
Other DBs
NCBI-GeneID:
111782949
NCBI-ProteinID:
XP_023519574
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Position
LG20:241743..256640
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AA seq
775 aa
AA seq
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MASFEKDDTPMLSDTGPPLLDEQLGSYFPSYASLARSSSLSIPTSSGIYVSDAKLVGYTG
PLRIERKSPFLESGSKYTRRKPEKSSQSSPGVTESKTAEPLTDKFPSFKTNDEPDWAIHH
YAGRNEHLIKSGQLGVCNDPFCITCPTYNSKASQQKSSRMRGIFDPEFHKDLYGEGKGWA
VKFRSVWCFLLPYIPGVMNPHAKVVQQWNKFFVISCLLAIFLDPLFFFVLAVHFVKKCIF
INWPMTTTLVVFRSMTDFVYFLHMLLQFRLAYVAPETRVVGAGELVDHPKKIAKNYLKGN
FFIDVLVVLPLPQIIVFLILPNSLGTSGANHAKNLLRTAVMAQYIPRLYRFLPLLAGQSP
SGFVFETAWANFVINLLTFMLAGHIVGSLWYLFGLQGVNRCFRDACNRTGSTFCLEYIDC
GHGDEAGYDIQDLRRDQWKSNENATACFAKEGFDYGIYLQAVNLTTESNLLTRYTYSLFW
GFQQISTLAGNQVPSYYVYEVLFTMGIIGLGLLLFALLIGNMQIFLQALGRRRLEMSLRR
RDVEQWMEHRRLPESLRRKVRQAERYNWASTRGVNEERIFENLPEDLQRNIRRHLFRFVN
KVRIFALMNYEPILDAIRERLRQRTYIEGSEIFTAGDIIEKMVFIVRGKMESRVDGNGIV
VPLSEGDVCGEELLTWCLEHSSINRDMKRHLIPAQKLVSNRTVKCSTNVEAFSLRAADLE
EVTSMFSRFLRNPRVQGAIRYESPYWRYLAATRIQVAWRYRKRRLSRAQTSHSNY
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctttgaaaaagacgatacaccgatgctatcagacactggtccaccattgtta
gatgaacaactgggttcttattttccttcgtatgcatcattggcccggagttcatcgcta
tcaattccaacttcttctgggatatatgtcagtgatgcaaagcttgttggttatactggt
cccttacgaattgaaagaaaaagtccattcctagagagtggttcaaaatatactcgccgt
aaacctgaaaaatcttcacagtcaagtccaggtgtgactgaaagcaaaactgcagagcca
ttgacagacaaatttccttctttcaagacgaatgacgagcctgattgggccattcatcac
tatgctggcagaaatgaacacttaataaagtctggccagctgggagtgtgcaatgatcct
ttctgtataacatgcccaacatataattccaaagcatcgcaacagaaaagctcaagaatg
agaggcatatttgaccctgagtttcacaaggatctctacggagaagggaaaggttgggca
gtgaagtttcggtctgtctggtgcttcttgcttccgtatattcctggagttatgaatcct
catgcaaaagttgttcagcaatggaacaagttttttgttatttcttgcttactggcgatc
ttcttggacccgttatttttcttcgtgcttgctgtccactttgttaagaagtgtatattt
attaattggccgatgaccacaacattggtggttttccgaagcatgaccgattttgtctat
ttcctacacatgcttctccagtttaggttggcttacgtggcaccagaaaccagagttgtt
ggagcaggcgaattagttgaccatccgaagaaaattgctaagaactaccttaaaggaaat
ttttttatagatgtgcttgttgttttaccgctgcctcagataatagtttttctaatcctg
ccaaactctttggggacatctggagcaaatcatgcaaaaaatctgttacgcactgcagtt
atggctcaatatattcccagactgtacaggtttctacctcttcttgctggtcagtctcca
agtggctttgtttttgagacagcatgggcaaattttgtcatcaatcttctcacctttatg
ttggctggtcatattgttgggtctctctggtatctctttgggcttcagggggtgaatcga
tgttttcgggatgcctgcaatcgcactggaagtacgttctgcttagaatatatagattgt
gggcatggggacgaagctggatatgacattcaggatttacggcgagatcagtggaaaagt
aatgagaatgctacggcatgttttgctaaagaaggttttgattatggaatctaccttcag
gctgtaaatcttactacagaaagcaatttactcacgagatatacttactcattgttttgg
ggattccagcaaatcagtactctggccggaaaccaagttccaagctattatgtctatgaa
gtccttttcactatgggtattattgggcttggtctattgctgtttgctcttctcatcggg
aatatgcagatttttcttcaggctcttggaagaaggaggttagaaatgtcattaagacgc
cgtgatgttgagcagtggatggagcatcgtcgcttgccagagagtttaagaaggaaagta
cgacaggctgaaaggtacaattgggcttctacaagaggcgtaaatgaagagaggattttc
gaaaatctgcctgaggacctacaaagaaacataagacgacatctctttagatttgtcaac
aaggtgcgcatttttgcactgatgaactatgaacctattttagatgcaatacgtgagaga
ctgcgacaaaggacatacatagaaggaagtgaaatttttactgctggagatatcattgag
aagatggttttcattgtacgggggaaaatggagagccgtgtagatgggaacgggattgtg
gttcccttatctgaaggagatgtctgcggcgaggaacttctaacatggtgtcttgagcat
tcctccataaacagagatatgaagcgacatctaattccagcacaaaaattggtcagcaac
cggacagtaaaatgctcgacgaatgttgaagcattttctctccgggctgcagaccttgaa
gaagtgaccagtatgttttctagattcctgcgaaacccacgtgttcaaggagccataagg
tatgaatcaccctactggaggtacctagcagcaacgcgtattcaagtagcttggaggtac
aggaaaaggcgtctatctcgagctcaaacctcccactctaactactaa
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