Cucurbita pepo subsp. pepo (vegetable marrow): 111782993
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Entry
111782993 CDS
T05351
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111782993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111782993
03036 Chromosome and associated proteins [BR:
cpep03036
]
111782993
Spliceosome [BR:
cpep03041
]
Complex B
Other components
Prp19-related factors
111782993
Complex C
111782993
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
111782993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT
TPR_14
Suf
TPR_19
TPR_2
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
111782993
NCBI-ProteinID:
XP_023519624
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All DBs
Position
LG20:6068638..6073682
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AA seq
703 aa
AA seq
DB search
MSSSKDADPTLGYLTRKDAEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPK
QKITDPTELADYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFNRARSVWERALEV
DYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQ
VFERWMGWMPDQQGWLSYIKFELRYNEVERARGIFERFVQCHPKVGAWIRFAKFEMKNGE
IGKARNVYERAVEKLADDEEAEQLFVAFAEFEERCKETERARCIYKFSLDHIPKGRAEDL
YRKFVAFEKQYGDKEGIEDAIVGKRRFQYEEEVRKNPLNYDSWFDYIRLEETAGNKERIR
EVYERAISNVPPAEEKRYWQRYIYLWINYALYEELDAADVERTRDVYRECLNLIPHAKFS
FAKIWLLAAQFEIRQLNLNGARQILGNAIGRAPKDKIFKKYIEIELQLGNIDRCRKLYEK
YLVWSPENCYAWSKYAELERSLCETERARSIFELAIAQPALDMPELLWKAYIDFEISEHE
FERTRELYERLLDRTKHLKVWISYAKYEASAMEDDSQLSELPEDKVQEYLRARKQQCIQQ
ARRVFEKAITYYRNSAPELKEERAMLLEEWLNMETSFGELGDVSLVQSKLPKKLKKRRQI
ASEDGPAGFEEYIDYLFPEETQTTNLKILEAAYRWKKQKVDDN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatccaaagatgcggatccaaccctgggctacctcactcgaaaggatgcagag
gtgaagttgccgcgacccactagggtgaagaacaagactcctgctccaattcagataact
gcagagcagatacttcgcgaggctcgggaacggcaggaggcagaaattagaccacccaag
cagaaaattacagatccgactgaactagctgattatcgtcttcgcaagcggaaggagttt
gaagaccttatacgccgtgtcaggtggaacgttagtgtttggatcaagtatgctcagtgg
gaagagtctcagaaggacttcaatcgggctcgttcggtttgggagcgtgcccttgaggtc
gattatcgaaaccataccctttggctcaagtatgcagaggttgagatgaagaataaattt
atcaatcatgcaaggaatgtctgggatcgagcagttaccctcttgcctagagtggaccaa
ctatggtacaagtacattcatatggaggaaatgttgggtaatgttgctggtgcaaggcag
gtttttgagagatggatgggctggatgccggaccagcaaggttggctctcatacatcaag
tttgagttgaggtacaatgaggttgaacgtgcccgaggcatatttgagcgctttgttcag
tgccaccccaaagttggggcatggatacgatttgccaaattcgagatgaaaaatggggaa
attggaaaagcaagaaatgtttatgagagagccgttgagaaattagctgatgatgaagag
gcagagcaattgtttgttgcttttgctgaatttgaggagaggtgtaaggaaacggaacgg
gcacgatgtatatataaattttccctagatcatatccccaaaggtagggctgaggatctc
tacaggaagtttgtggcatttgagaagcaatacggggataaggaaggaatagaagatgct
atagtggggaagaggaggtttcaatatgaagaggaagtgaggaagaaccccctaaattat
gattcttggtttgattatataagattggaggagactgcagggaacaaggagaggatcagg
gaagtgtatgaaagagcaatatccaatgttcctccagctgaagagaaacggtactggcag
cgttatatttatttatggatcaattatgcactatatgaagaactggatgctgcagatgtc
gagcgtacccgtgatgtgtatagggagtgtctaaatttgattcctcatgcgaagttttca
tttgcaaagatatggctattggctgcacagtttgaaatacgacagttgaaccttaatggt
gcccgacaaatactagggaatgcaattgggagggctcctaaagataagatattcaaaaag
tatatagagatagagctgcagctgggaaatatagatagatgccgtaaactatatgagaag
tatttggtgtggtcacctgaaaattgttatgcatggagcaagtatgcagaattggagaga
tctctgtgtgaaactgagcgtgccaggtctatatttgagctcgctattgcacagcctgca
ctggatatgccagagttattgtggaaggcctacattgattttgagatatccgagcatgaa
tttgaaagaacgagagagctgtatgagagacttctagacagaacaaaacacttgaaagtg
tggatcagttatgctaagtatgaggcatcagcaatggaggatgacagccagctttcggaa
ttaccagaagacaaagtgcaggaatatcttcgtgcacggaagcaacaatgtattcaacag
gctagaagggtcttcgaaaaagctattacttactacagaaattccgcgccagagttaaaa
gaggagagagctatgctccttgaggaatggttgaatatggagacgagtttcggtgaactt
ggtgatgtcagcttagtgcaatccaagcttccaaagaagcttaagaagaggcgtcaaatt
gctagtgaggacggtccggccggtttcgaggaatacatagattacttgttccctgaagaa
actcaaactacaaatctcaagatcctcgaagctgcataccgttggaagaagcagaaagtt
gacgataattaa
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