Cucurbita pepo subsp. pepo (vegetable marrow): 111783053
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Entry
111783053 CDS
T05351
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015
mRNA surveillance pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111783053
09122 Translation
03015 mRNA surveillance pathway
111783053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111783053
Spliceosome [BR:
cpep03041
]
Complex A
Other components
Complex A specific factors
111783053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
111783053
NCBI-ProteinID:
XP_023519697
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All DBs
Position
LG20:7926883..7930876
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AA seq
486 aa
AA seq
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MSGMYDQGGDAAPPSYGAPGGGGGYGGGGGYGGKGGDGGYGGGGRGVGGGRGFGGRGGGG
GGGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVEC
NKCGAPSPGGASGGGGGGFNRGGADGGYNRGGGDGGYNRGGGDGGYGGNRNGRGGSFHGG
RSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGGLAGSYPPSYHGGSADY
GTDAVPPPASYSGTTYPPTYGGPSGGYGGDSLGDGRSSAGRGGPSAGYDGGYNAGGRGGY
NSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPTDVTIDE
LRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPQAAHSAGGFYN
NYDLRGYNISVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGASGPDRHQHGG
NRSRPY
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggatgtacgatcaaggaggagacgctgctcctccgtcttacggtgcccctggg
ggtggtggtggatacggtggtggtggtggttatggtggaaaaggtggtgacggtggatat
ggaggcggaggccggggagtcggcggcggtagaggctttggtggacgaggtggcggcgga
ggtggaggctacggtggtcgaggtggcagtggcggagggggttatcaaggaggagatcgc
ggagggcgaggcagtggacgtggtggcggaggtggtcgtggcggaagcggcagagatggt
gattgggtctgccctaatcctggctgcgggaatttgaactttgctaggagagtggagtgt
aataagtgtggtgcaccctcacctgggggtgctagcggcggtggtggtggtggttttaat
agaggtggagctgatggtggttataatagaggtggaggtgatgggggttacaatagaggt
ggaggtgatgggggttacggtggtaatcgtaatggcaggggtggtagttttcatggtggt
cgaagtggaactcatgatggaggccgaaatgaaggagggaacagaggtggtaactcgtac
ggtggtcaccagggaggagaagatagtggttacagtcaggttcccccttcctcggcaccc
tcatctggtggccttgctggctcttatccaccatcttaccatggtggaagtgcagattac
gggactgatgcagttcctcctcctgcaagctacagtggaactacataccctccaacttat
ggtggtccatctggtggctatggtggtgatagtctaggtgatgggcggagttctgccggt
cggggtggaccatcagctggatatgacggcggctacaatgcaggtggtagaggtggctat
aattctggtggtagaggaggaggaagctataatactggtggtggtagaggtggcggttat
ggaagtacaccggcagcagagccagcgcaagttaaacagtgcgatgataattgtgatgat
tcgtgtgataactctagaatctatgtttctaatttgccaacagatgtgacaattgatgaa
ttgagagaactatttggtggaattggtcaaattggaagaattaagcagaagaggggctac
aaggatcagtggccttggaacattaaaatatatacagatgagatgggaaataacaaaggc
gatgcatgtgtatcatatgaagatccccaagcagcgcattctgctggcggtttctataac
aattatgatttgagaggctataacatcagtgttgcaatggctgagaagtctgcaccgagg
gctccacctacatacaaccatggtggtggtggtagaggcggatatggaggtggtggggat
aggcgcagagatagctatagggatggagcctctggacctgatagacatcagcacggcgga
aatcgatctcgtccttactga
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