KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111783061
Entry
111783061         CDS       T05351                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03420  Nucleotide excision repair
cpep04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111783061
  09124 Replication and repair
   03420 Nucleotide excision repair
    111783061
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpep04121]
    111783061
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111783061
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpep04147]
    111783061
Ubiquitin system [BR:cpep04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     111783061
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      111783061
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      111783061
Exosome [BR:cpep04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   111783061
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 111783061
NCBI-ProteinID: XP_023519705
LinkDB
Position
LG20:3031693..3044603
AA seq 835 aa
MSLPTKRSASATANTAASSVVSSSPTSKASISSPPMKKTKSQAVPTSLDPNKNGLHHHDR
PFSNITSSAAADDADFDPSSMALDEDLKPDDSPLIGASRAVATNLSRKKATLPQPAKKLV
IKLVKAKPTLPANFEEDTWAKLKSAICAIFLKQPNSCDLEKLYQAVNDLCLHKMGGNLYR
RIEKECEVHISAALQSLVGQSPDLVVFLAYVEKCWQDFCDQMLMIRGIALYLDRTYVKQT
PSVCSLWDMGLQLFRKHLSLSSEVEHKTVTGLLRMIEKERLGEAINRTLLNHLLKMFTAL
GIYSESFEKPFLEYTSEFYAAEGMKHMQQSDVSEYLKHAEGRLQAEQDRCLHYLDSSTRK
PLIATTERQLLERHISAILDKGFTLLMDGNRMGDLLRMYTLISRVNALESLRQALSSYIR
KTGQNIVMDDEKDKDMVSSLLEFKASLDTIWEESFSKNEAFSNTIKDAFEHLINLRQNRP
AELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGK
SASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPMGIEMS
VHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWHNSLGHCVLKAEFPK
GKKELAVSLFQTVVLMLFNDAEKLSLQDIRESTGIEDKELRRTLQSLACGKVRVLQKMPK
GRDVEDNDSFMFNEGFTAPLYRLKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIM
KTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2508 nt   +upstreamnt  +downstreamnt
atgtctctccccaccaaacgctctgctagcgccaccgccaacaccgccgccagctccgtc
gtctcttcttcaccaacttccaaagcctccatctcatcccctcctatgaagaaaaccaaa
tcccaagctgttccgacctcacttgaccccaataaaaacggcctccaccaccacgaccgc
cctttttccaacattacttcatcggccgccgctgatgacgctgatttcgacccttcctct
atggccctagatgaagatctcaagcccgacgattcccctctcattggcgctagtcgcgcc
gtcgcaaccaatttgtcgcggaagaaagccactctccctcagcctgccaagaaactcgtt
attaagcttgttaaagcaaaaccgacacttcctgctaattttgaggaggatacatgggca
aagttgaaatcagccatatgtgccatattcttgaagcaacctaattcttgtgatctggag
aaactttatcaggctgttaacgatctttgcttgcacaaaatgggtggaaatctttatcgg
cggattgaaaaggagtgtgaagtgcacatatctgcagcattacagtctttggttgggcaa
agcccagatttggtggttttcttggcttatgttgagaaatgctggcaagatttttgtgat
cagatgttgatgattcgtggcattgctctgtatctggacaggacgtatgtcaaacaaaca
ccaagtgtgtgctcattatgggacatgggcttgcaacttttcagaaaacatttatcttta
tcttcagaagttgagcacaaaactgttacgggtctattaagaatgattgagaaagaaagg
ttaggtgaagcaattaatcggactctcctcaaccaccttctgaagatgtttactgcacta
ggaatttactcggagagctttgaaaagccattccttgaatacacttctgagttttatgct
gctgaaggcatgaaacacatgcagcagtccgatgtttcagaatatttaaagcatgcagag
ggaaggttgcaggcagagcaagatagatgtttgcactatcttgattcaagtacaagaaag
cccctgatagcaaccacagaaaggcaactccttgaacgtcatatatctgcaattcttgat
aagggttttacattgctgatggatgggaatcgtatgggagaccttctgaggatgtacacg
cttatttcaagggtcaatgcccttgaatcacttagacaagcccttagttcatatatacga
aaaactgggcaaaatattgtcatggatgatgagaaggacaaagatatggtctcatcactt
ttagaattcaaggcttctcttgatacaatatgggaagaaagcttttcaaagaatgaagct
tttagcaatacaataaaggatgcatttgagcatcttattaatcttcgtcagaatcgtcct
gctgaactgattgcaaagtttctggatgaaaagcttcgtgctggaaacaagggtacttct
gaagaagaattggagggtacactggacaaagtgttggttctgttcaggtttattcagggt
aaggatgtgtttgaagccttttacaagaaggatctagcaaaaaggctacttctaggaaag
agtgcttctatcgatgctgagaagtctatgatctccaaactgaagaccgagtgtggtagt
cagtttacgaacaaacttgaaggaatgtttaaggacattgagttgtctaaagagatcaac
gaatctttcaagcaatcatcccaagcgaggacaaagcttcccatggggattgaaatgagt
gttcatgtcctgactactgggtactggccaacttatcctcccatggatgttaggcttccc
catgagttgaatgtctaccaggacattttcaaggagttttatttgagcaagtacagtggg
agacgcctaatgtggcataattcattaggccactgtgtgttgaaagccgagttcccaaaa
ggtaaaaaggagttggcagtttccctatttcagaccgtggtcttaatgcttttcaacgat
gctgaaaaactaagcctgcaagatattagagaatctactggaattgaggataaagaactc
agaagaactttacagtcacttgcctgtggaaaagttcgagtattacaaaagatgccaaaa
ggcagagatgttgaggacaatgattcatttatgttcaatgaaggatttactgctccactc
taccgtcttaaggtaaatgcaattcagatgaaggaaacggtagaagagaataccagcact
actgaaagagtctttcaggaccgtcaatatcaggtcgatgctgctattgttcgaataatg
aaaacccgaaaagtgctaagtcacactcttctgataactgaacttttccaacagttaaag
tttccaataaagccagctgatttgaagaagcggattgaaagtcttattgatagagagtac
ctagaacgtgacaagaacaaccctcagatatacaattaccttgcctaa

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