Cucurbita pepo subsp. pepo (vegetable marrow): 111783070
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Entry
111783070 CDS
T05351
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111783070
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpep01002
]
111783070
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111783070
03036 Chromosome and associated proteins [BR:
cpep03036
]
111783070
Peptidases and inhibitors [BR:
cpep01002
]
Metallo peptidases
Family M1
111783070
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111783070
Coactivators
SAGA/TFTC/STAGA complex
111783070
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111783070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
DUF6842
Motif
Other DBs
NCBI-GeneID:
111783070
NCBI-ProteinID:
XP_023519716
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All DBs
Position
LG20:562688..580575
Genome browser
AA seq
1360 aa
AA seq
DB search
MAKPRKPKNTDDAKPPDNSGAVVRHQKLCLSIDIDKRRVYGFTELEIAVPDIGIVGLHAE
NLGIVSVSVDGDPTEFEYYPRTQHVESEKSFKAVSSPTSAADAAGSIYLSSIEKELVPNL
LINCCKAFKNGSEKQDQPFLENGVQPAVEDKQNIRLVRIDYWVEKSDVGIHFNDHIAHTD
NQIRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQVLSKENPPCKTYVYRVD
IPVNAHWISLAVGPFEILADHQNGFISHMCSPVNSLKLKHTVEFFHSAFSCYKDYLSVDF
PFGSYKQIFIEPEIAVSSACLGVSMCIFSSHFLFDEKIIDQTIDTRIKLAYALARQWFGI
YITPEAPNDEWLLDGLAGFLTDLFIKKNLGNNEARYQRYKANCAVCRADDSGITTLSSSS
ACKDLYGTQRIGIYGKIRSWKSVAILQMLEKQMGPESFRKILQNIVSRAKDTTSTSQSLS
TKEFRHLANKIGNLERPFLKEFIPRWVESCGCPLLRMGFSYNKRKNMVEMAVSRECTVTP
ATILENRDSDTGWPGMMSIRIYELDGVFDHPVLPMTGESWQLLEIQCHSKLAARRLQKTK
KGSKPDGSDDNADIPALDVRSSVESPLLWLRADPEMEYLAEIQFHQPVQMWINQLEKDKD
VIAQAQAIATLEMLPQPSFSVVNALNNFLRDPKAFWRVRIEAALAMAKTASEDTDWAGLL
NLIKFFKSQRFDADTGLPKPNEFRDFPEYFVLEAIPHAVAMVRATDQKSPREAVEFVLQL
LKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILVLASLLKRIDRLLQFDRLMPSYNGI
LTISCIRTLTQIALKLSGLLSLDRIIELIRPFRNFNSTWQVRIEATRALLDLEYHCNGID
AVLLLFIKYLEEEKSLRGQVKLGVHVMRLCQIMRRSDSNDSVNNDTLVALLLLLEGHMAF
NNVCLRHYLFCILQVLAGRPPTLYGVPREYKTLHMGDSGTCSEQKRVLTSLIPEFNPPEP
SSVSAVAPVPCIPATLSSEPLHTPKPRPDSLAIPEVSKEGAAVVEVPKQATAIAEAPREA
ASVSNSHERKLPVVKIKVRSSAATSRADADNQTTERSHAAPRETDVGPSSSVSVDAPQRN
IAEATSISNHILEEVNSCHDHGSHMTASIGSAKPASYGDDLGKEFQCTADSSRAFGHFQP
EDPSSSSIIQDNNIDADAQKYASLQTLSLPQHDHGLASLHSRHGKKEKKKDKEKKRKRDS
HKEHRNDPEYIERKRLKKEKKQKEKEMAKLLNEEVKPLPIAMPRIKEPPTKSTPVQLESN
EPSGSRLIVGVNSKPEASEGTASAAPKLRIKFKNRTLNNS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcctcgcaagcccaagaacaccgacgacgcgaagccacctgacaactccgga
gctgtagttcgtcaccagaagctttgtctctccatcgacattgacaagcgtcgcgtttat
gggttcaccgagttggaaatcgcggttcctgatattggcatagttgggttgcacgcggag
aatcttgggattgtgagtgtttcagtggatggcgaccctactgaattcgagtattatccg
cggactcaacatgtggaaagtgagaagagttttaaagcagtgtcgtcgcctacctctgct
gcagatgctgcggggtcaatttatttatcttcaatcgagaaagaactggttcctaatttg
ttgataaactgctgcaaggctttcaagaatggaagtgagaagcaagaccagccatttctg
gagaatggagtgcaaccagcagtcgaggacaagcagaatataaggctggttcgtattgat
tactgggtagagaaatcagacgtaggtattcacttcaatgatcatattgctcacacggac
aaccaaataaggcgtgcaagatgctggttcccttgtatggatgatggcctacaacgatgc
aagtatgacctcgagtttactgtctctcaaaatcttgtggctgtcagtaatggaattctg
ttgtaccaggtcttgagcaaggagaatcctccctgcaaaacttatgtttatcgtgtagac
atccccgtcaatgcacattggatatcacttgccgttggaccatttgaaatccttgctgat
caccaaaatggatttatatcacacatgtgctcgccagttaattctttaaagctcaagcat
acagtggagttttttcatagtgcattcagctgctataaggattacctctccgtggacttc
ccatttgggtcatacaaacaaatcttcatagagccagaaattgcagtatcatcagcatgt
ttgggagtttccatgtgtatatttagttctcattttttgtttgacgagaaaatcattgat
cagaccatagatacgaggattaaacttgcttatgctcttgcaaggcagtggtttggtatt
tatattacgcctgaagccccaaatgacgagtggttgttggatggtcttgctggttttttg
actgatttattcatcaagaagaacttaggaaataatgaggcacgctaccagcgatacaag
gcaaattgtgctgtttgtagagcagatgatagtggtataaccaccttgagttcctcttct
gcttgtaaagatttgtatgggacccaacgcattggtatatatggaaaaataagatcatgg
aagtctgtggcaatccttcaaatgttggagaagcagatggggcctgagtctttccgcaag
attctgcaaaatattgtttctcgtgctaaggatacaacctctacatcacaatcacttagc
acaaaagagtttcgtcatttggccaataagattggaaaccttgagcggccatttcttaaa
gagttcattcctcggtgggttgaatcatgtggttgtccactgctgaggatgggattttcc
tacaacaagcggaaaaatatggttgaaatggcagtgtcacgggaatgcacagtaacacca
gccacaattttagagaatcgggacagtgatactggatggcctggcatgatgagtatcagg
atttatgaacttgatggtgtgtttgatcatccagttctcccaatgactggtgagtcgtgg
cagctactagaaatacaatgccattccaaacttgctgctagacgcctccagaaaactaaa
aaggggtcaaaacctgatggttctgatgacaatgctgatatacctgcgcttgacgtccgc
tctagtgtggaatctcctttgttatggttgcgagcggaccccgagatggaataccttgct
gaaattcagtttcatcagcctgttcagatgtggattaatcaattagagaaagacaaggat
gtcattgctcaagcacaagcaatcgcgactttagagatgttgcctcaaccatctttttct
gttgttaatgctcttaataatttcctcagagaccccaaggccttctggagagtaagaatt
gaagcagcattagcaatggccaaaacggcctcagaggatactgattgggctggtttgctt
aatttgattaaattttttaaaagtcagagattcgatgcagatactggactccccaagcca
aatgaatttcgtgattttcccgagtattttgttcttgaggccattcctcatgctgttgct
atggtcagggctaccgaccaaaaaagccctagagaagctgttgagtttgttttgcaactt
ttgaagtacaacgacaacaacgggaatccttactctgatgttttctggttggctgcacta
gtccagtcagttggtgaacttgaatttgggcagcagagcattctcgttttagcatcgcta
cttaaaaggattgatagacttttgcagtttgacaggctgatgcctagctataatgggatc
ttgactattagctgcatccgaaccttgacccagattgcactgaaactatctggacttctc
tctcttgatcgtatcattgaactgataagaccttttcgaaattttaattccacgtggcaa
gttcgaattgaggctacccgagcacttctcgatcttgagtaccattgcaacggaattgat
gcagtattgttattgtttattaaatatttagaagaagagaaatccttgcgagggcaagtg
aagctgggggtccatgttatgcgtttatgtcagataatgagaagatctgattcaaatgat
tcagtcaataatgacactcttgttgctttgctcctcctacttgaaggccacatggcgttt
aacaatgtttgtctacgtcactacttgttctgtattttacaagtccttgcaggaaggccc
ccaacactttatggagttcccagggaatataaaacattgcatatgggtgactcaggaact
tgcagtgaacaaaagagggttttaacttctctcattcctgaattcaatccaccagagccg
tcgtcagtctctgcagtagcgcctgtgccatgtattccagcaaccctgtcatcagaacca
cttcatactcccaaaccgaggcctgacagcttggcaattcccgaggtttccaaggaagga
gcagcagttgtagaggttcccaagcaagctacggcaatagcagaagctcccagagaagca
gcctctgtttccaacagtcatgagaggaagttgccggttgttaagatcaaagtcagatca
tctgcggctacaagtagagcagatgccgataatcaaaccactgaaagatctcatgctgca
cctcgtgaaacagatgttggtcctagtagttctgtttccgttgatgcccctcaaagaaat
attgcagaggctacaagtatcagcaaccatattctggaggaggttaactcctgtcatgat
catggatctcacatgacagccagcattggcagtgcaaaacctgcgagttatggtgacgat
cttgggaaggagttccagtgcactgctgattccagtagggcttttggacattttcagcca
gaagatccttcatcatcgagcatcatacaagataacaacattgatgctgatgcacagaag
tatgcaagtcttcagacactttctttaccacagcacgatcatggcttagcctctttgcac
tctcgccatggaaaaaaggagaagaagaaagacaaagaaaagaaacgtaaacgagatagt
cataaagaacatcgcaatgatcccgaatacatcgagcgcaaacgactgaagaaagagaag
aaacaaaaagaaaaagagatggcaaagctattgaatgaggaggtgaagccactgccaatt
gcaatgcctcgtataaaagaaccaccaaccaagtcaacacccgtgcagctagaatcaaac
gaacctagtggatcaagattaatcgtaggagttaatagtaagcccgaggcatcagaaggt
actgcttctgctgctcccaaacttagaattaaattcaaaaatcggacgttgaacaattca
taa
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