Cucurbita pepo subsp. pepo (vegetable marrow): 111783100
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Entry
111783100 CDS
T05351
Name
(RefSeq) phytochrome E-like
KO
K12123
phytochrome E
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
111783100
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Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
PAS_4
PAS_9
HisKA
HATPase_c
PAS_10
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-GeneID:
111783100
NCBI-ProteinID:
XP_023519751
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Position
LG20:complement(2847112..2853843)
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AA seq
1129 aa
AA seq
DB search
MENSRGGGRGMAAFSSSAESNTRARPSNTASTDNRAAALVQYNADAGLLNKFEQSDASGE
SFNYSRSVLEAPQSVPEEQITAYLSKIQRGGMVQPFGCLLAIEESSLKIISYSENCFELL
GINYQFESAPGKGLIGVHIRALFTPSSGASLAKAASSREISLLNPVWVYSRNTQKPFYAI
LHRIDVGIVIDLEPARSVDPALSLAGAVHSQKLAVRAISRLQALPGGDIGVLCDTVVEDV
QKLTGYDRVMVYKFHDDEHGEVVSEIRRSDLEPYLGLHYPAIDIPQAARFLFKQNRVRMI
CDCHAKPVQVIQSDELKQPLCLVNSTLRSPHSCHLQYMANMGSIASLAMAVIMNSDDSPT
RLWGLVVCHHTSARYVPFPLRYACEFLMQAFGLQLYMELQLALQITEKKVLKTQTLLCDM
LLRGSPYALLTQSPSIKDLVKCDGAALYYQGACCLLGVTPTEAQVKNLVEWILNNHGDST
GLSTDSLADAGYPEAASLGDAICGMTAARISSKDFLFWFRSHAAKEIQWGGAKHHPDDKD
DGGRMHPRSSFKAFLEVAKSKSMSWEAQEINAIHSLQLIMRESFSSARDSDSKAEMSVQQ
SDTVSQDIGELSSVACEMVRLIETATAPIFGVDSTGVINGWNAKIAELVGLQTGEALGRS
LDEIVHDDSRGTVGNLVLHALQGVEDKNVELKLRKFGTDKENSAVYIVVNACASRDYTNK
VIGVCFVGQDITSEKGMRDRFIRLQGDYRTIIESLSPLIPPIFVSDENGYCCEWTAAMEK
LSGWSKDEVIGKMLVGEIFGNFCRLKDLDTLTRFMILLYQGIGGEQTEKFPLGFFNKNGD
YVEVLLTSNKRTDAEGNVIGCICFLQVVEPNLQGVSEGLGLGERRGNLQLKELTYLKREM
KNPLNGIKFTHELLVNSGITDNQKLFLVTSDACERQIMAIIEDMDFRSLEVGQVQINRDE
FVLGSVLDAIICQIMIVVREKNIQLFHEIPEEIKVLTLCGDQIKLQLVLSDFLLSVVQNT
PALDGWVEIKISAGLKLIQDGNEHIHLQIRMSHPGQGLPPELIQDMVGGGQQWSSEQGLA
LNLSRRLLNKLNGNACYVREQTKCYFLIDLELKLRRSRGSLEGTTSQRT
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggagaatagtcggggaggaggaagaggaatggcggcgttttcgtcctcggcggaaagc
aataccagggctcgtccgagcaacaccgctagcaccgacaacagagctgcggcacttgtg
caatacaatgctgatgctgggcttttgaacaagtttgagcaatcggatgcctctggtgag
tcttttaactattcgagatcagttcttgaagctccacagtctgtacctgaagaacaaatt
actgcttatctgtctaagattcagaggggtggaatggttcaaccgtttggttgtttgctt
gcgattgaagaatctagtcttaagattattagctatagtgagaattgttttgaattattg
gggataaattatcagtttgagtcggcaccggggaagggtctaattggggttcatataaga
gctctgtttacgccttcctccggtgcttctttggctaaagcggcttcatccagggagatt
tcgttgttgaatcctgtttgggtttattctaggaatacccagaagccattttatgccata
ttgcataggattgatgtggggattgtaattgatttggagcctgcacggtctgttgatcct
gcactgtcgcttgccggcgccgtgcattcacagaaacttgcggttcgagccatttccagg
ttgcaggctctacctggtggtgatattggtgttttatgtgatacggttgtggaggatgtt
cagaagcttacagggtatgatagagtgatggtgtataagttccatgatgatgaacatggt
gaagtagtgtcagaaatcagaaggtcggacttggagccatatctcggtttgcactatcct
gccattgatataccccaagctgctcgtttcttgttcaagcagaaccgcgttaggatgatt
tgcgattgccacgcgaagcctgtgcaggtcattcaaagtgatgagctaaagcagcctctt
tgtttggttaattcaacacttcgatcaccacatagttgtcatttgcagtacatggcaaat
atgggttccatagcctcattggcaatggcagtaatcatgaacagtgatgactctccaaca
aggttatggggcctggtagtgtgccaccatacttcagcacgatatgtccctttcccactt
cgttatgcttgcgagtttctcatgcaggctttcgggctgcaactttacatggagcttcaa
ttggcattacaaataacagagaaaaaggttctcaagacacaaaccttactctgtgacatg
ctcctccgaggctccccttatgcattgctgacccagtcacctagtataaaggatctcgtg
aagtgtgatggagctgcattgtactatcagggggcatgttgtctactaggtgtaactcca
actgaagcccaagttaaaaaccttgtcgagtggatactcaataaccatggagattctaca
ggactgagcacggatagcttggctgatgctggctatcccgaagctgcttcactaggtgat
gcaatatgtggaatgactgctgcaagaattagttcaaaagatttcttattctggttccgt
tcccatgccgcaaaagaaatccaatggggaggagccaagcatcatccagatgataaggat
gatggtggaagaatgcacccaaggtcatcatttaaagcatttcttgaagttgcaaagagt
aaaagtatgtcatgggaagctcaagaaataaatgccattcactcattgcagcttattatg
agggagtctttctcgagcgctagggacagtgattcgaaggcagaaatgtctgtccagcag
agtgatactgtgtctcaggacatcggcgaactcagttcagtagcttgtgaaatggttaga
ttgattgaaacagcaaccgctccaatttttggggttgactcaactggtgtgatcaatgga
tggaatgctaaaatagctgaactcgtaggattacaaactggagaagctttggggagatct
cttgatgaaatcgttcatgatgattcacgtggaactgttggaaatttagttcttcatgct
ctgcaaggtgtggaagacaaaaatgtggagttaaaactgagaaagtttggaactgataaa
gaaaactcagctgtgtatattgtagttaatgcttgcgcaagtagggattacacaaataaa
gttattggggtttgctttgttgggcaagatataacgtcggagaagggcatgagggataga
tttatccgtctgcagggagattataggacaatcattgaaagtctgagtccattgattcca
ccaattttcgtttccgacgagaatggttactgctgtgaatggactgctgccatggagaag
ctttctggttggagtaaagatgaagttatagggaaaatgcttgtaggggagatttttggg
aacttctgtaggttgaaagatctagataccctcactaggtttatgatcctattatatcaa
ggcattggtggtgaacaaactgagaagtttccattaggatttttcaataagaatggtgac
tatgtggaggtgcttttaacatcaaacaaaaggactgatgcagaaggaaatgtcattggt
tgtatctgtttcctgcaagttgttgagccaaacttgcaaggggtctctgaaggactcggc
ctgggcgaaagacggggcaatttgcagcttaaggagttgacttacttaaagcgggagatg
aaaaatcctttaaatggcatcaaatttactcatgaactccttgtaaattctggcattaca
gacaaccagaaactcttccttgttactagcgatgcgtgcgagagacagatcatggcaatc
attgaggatatggacttcagaagtttagaagtgggccaagtacagataaacagagacgag
tttgtcctcgggagtgttctggatgccattatctgtcaaatcatgattgttgtcagagag
aagaacatacaactgtttcatgaaattccagaagaaattaaagtgttaactctttgtggc
gatcaaattaaacttcagctggttttatcagatttcttacttagcgtagtgcagaacacg
cctgctctggacggttgggttgaaatcaaaatttcagctggtttgaagcttatacaagat
ggaaatgaacatattcacttgcagatcagaatgtcacatccaggtcaagggctgcctcct
gaactaatccaagatatggttggaggaggacaacagtggagttcagagcaaggcctcgcc
ctaaatctgtcacgcagacttctcaataaattaaacggtaatgcctgctatgttagagag
caaactaaatgctacttcctcattgatctcgaactcaagttaaggcgctcgagggggtcg
ctggaaggcactacaagccaaaggacttga
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