Cucurbita pepo subsp. pepo (vegetable marrow): 111783101
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Entry
111783101 CDS
T05351
Name
(RefSeq) uncharacterized protein LOC111783101
KO
K13217
pre-mRNA-processing factor 39
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111783101
Spliceosome [BR:
cpep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111783101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
111783101
NCBI-ProteinID:
XP_023519752
LinkDB
All DBs
Position
LG20:complement(2857211..2865433)
Genome browser
AA seq
1041 aa
AA seq
DB search
MANDLQLLNNSSTKAQPAESKSAVGLDESKLHEGVPKCGLNFDEWTSLISEIEMKHSDVI
EEISLVYDSFLSEFPLCHGYWRKYAAHKTRLCSVDKVIDVFEQAVQSATYSVGIWVDYCS
FSISVFEDPADVRRLFKRAISFVGKDYLSYSLWDKYIEFELSQQQWDSLALIYIQTLRFP
TKKLSYYHSSFRKLTDSLRENIQSDTGCNPSMPTELEALPNGEAPICCTDSELSSVIKDL
LDLSTGTARYSTLQKYVHAGEKLYDEAWQLEEKIIHFERKIRRTYFHVKQLDADQLKNWH
SYLDFVEMYGDFDWAVKLYERCLIPCASYPEFWMRYVEFMEIKGGRELAMFALERATKTF
LKRVPVIHLFNSRFKEQIRDLSGARAAFLPLDGDLDSNFVENIILKANMEKRMGKSTAAL
NVYREALEMALMKNKLDVLPSLYIHFSRLKHMISGRADAAIEVLIDGIRNVPLCKLLLEE
LINFVMVQGAPKLINLVDPIVANAISLKPDVSRGWSEQDREDISTLYLKAIDLCGTIHDV
MRVWNRHIKLFPQSIRAMPYEDPTRTEALKMTKGGKQTLDSTVTNQPIKDGQFDLSTQLP
LEENKQSLQGNQNFQNDQSSNGNEPISCLLGNRNNDTKKSAIDHIHSGEAEIDAEARVQQ
DSPKVSEHYGEGGNQVELAPMPMDNSKEDEYGNALGQNLKNLSIGSLSLSPKNNDKIDVL
PKACHEGEAPFENSMSSESVCNTDEGALIHNPQGVRSSGSIQISKEVASPSSSPSLDKPI
HTQAPSQFHVGATGNRNWHHKHSAGNLHHDSQHRFQSHSRRRPHRTWQDSPRDYQGMRSG
QTPDSQDYASESIASQEPQVERSSQEYNQIQSAQQQNFPTIQSQLPSQGFQEKSQYITPN
EEQYGYMQSGQAPHTYEQMWQYYYYQQQQQQQYFLQQQQLQQSQNFQQLQQSQNFQQQYN
QQQLQLQQHYFQSQQQYPYHVQLQQQYHMQQQLQQTQQQQHLLGLQPQEVSQTDQQSFKQ
QEHQPEKMEEEEQRQHMKQDS
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgatcttcaacttctcaataattcaagcacaaaggctcaaccagcagaatca
aagtccgcagttggtttagatgagtccaaacttcacgaaggtgttcccaaatgtggattg
aattttgatgaatggacttcacttatttcagagattgagatgaagcactcagatgtcatt
gaggagatttctttggtgtatgattcattcttgtccgagtttcctctatgccatggatac
tggagaaagtatgcagctcataaaacaaggttgtgctctgtggataaggttattgatgtc
tttgaacaagcagttcaatcagcaacttactctgtcggtatttgggttgactactgtagt
ttcagcatatcagtttttgaagatccagctgatgttcgcagattgtttaagagggcaata
tcctttgtcggaaaggactatttaagctatagcttgtgggacaagtacattgagtttgag
ctatctcaacagcagtgggattctttagctctgatatacattcaaactctgagatttcct
accaaaaagttgtcttattaccacagcagctttagaaaattgaccgattctctgagagag
aatatccaatctgataccgggtgcaatccttcaatgcccacagaattagaagctttgcct
aatggcgaagcccccatctgttgtacagacagcgagctatcctctgtcattaaagacctt
ctggatctgtcgactgggacagcaaggtatagtacattacagaagtatgtgcatgctggg
gaaaaactctatgacgaagcatggcaactggaggaaaaaattattcactttgagcgtaaa
atcaggaggacatactttcatgtaaaacaacttgatgctgatcaactgaagaattggcat
tcttatctggactttgtggagatgtatggagattttgactgggcggttaaactctacgag
agatgcttaattccctgtgctagttatcctgagttttggatgcgctatgtggaatttatg
gaaataaagggtggaagagaattagcaatgtttgctctagagcgtgcaacaaaaactttt
cttaagagagttcctgttatccatcttttcaattcaaggtttaaggaacaaataagagat
ttatctggtgcacgtgctgcttttcttccgcttgatggagatttagattctaactttgtg
gagaatattatattgaaggctaatatggagaaacgaatggggaaatctacggcagctctt
aatgtttacagagaagcactggaaatggctttgatgaagaacaaattggatgttctacca
tccctgtatattcatttttctcggcttaaacacatgatttcaggacgtgcagatgctgcc
attgaagtcttaatagatgggatcagaaacgtacctctctgtaaattacttcttgaggaa
cttataaacttcgtaatggtgcaaggagcgccaaagcttataaatttagttgatcccatc
gtagctaatgcaatatctctcaagccagacgtatctcgaggttggagtgagcaagacaga
gaggatatttcaactctttatttaaaggctattgacctgtgtggaaccattcatgatgta
atgagggtgtggaatcgacatattaaattgtttccacagtctattagagcaatgccatat
gaagaccccacacggacagaagcgttaaaaatgaccaaaggaggaaaacaaacattagat
tctactgtaaccaaccagccaatcaaagacggtcagtttgatctatcaactcagcttcct
ctagaagagaacaaacaatctctgcagggaaaccaaaacttccagaatgaccaatcttcc
aatgggaatgaaccaatttcctgtttactgggaaatcgcaataatgatacgaaaaaatct
gccattgatcatattcattctggagaagctgaaattgatgcagaggcaagagtgcagcag
gattctccaaaagtttctgagcattatggagagggtggaaatcaggttgaattagcacca
atgcctatggacaactcaaaagaagatgagtatggcaatgctttgggacagaatttgaaa
aatctttcaattgggagtctttctctaagccccaagaacaatgacaaaatagatgtactc
cccaaagcgtgtcacgaaggggaagctccctttgagaacagtatgtctagtgaaagtgtc
tgcaatacagatgaaggggctttaatacacaacccacaaggtgtcagatcttctggttcc
atccagatatctaaggaagtggctagtccatcatcatctccaagcctcgataaacctata
cacacccaagcaccttcacagtttcatgtgggtgcaactggaaataggaactggcaccat
aaacattctgctggtaacttacatcatgactcccaacatcgatttcagtcacattcacgg
agaagacctcatcgaacatggcaagattctcctcgagactaccaaggaatgagatctggt
caaacaccagatagtcaagattatgcctctgaatcgattgcttcacaggaaccacaagtt
gaacgaagcagccaagaatacaatcagattcaatctgctcagcagcagaacttccccact
attcagtctcaacttccttctcaaggttttcaagagaagtctcaatatattacaccaaac
gaggagcaatatggttacatgcaaagtggtcaggccccacatacctatgaacagatgtgg
cagtattattactaccagcagcagcagcagcagcagtactttttgcagcagcagcaactt
caacagtcacagaattttcaacaacttcaacagtcacagaattttcaacaacagtataac
cagcagcaactgcaactgcaacagcattattttcagtctcaacaacaatatccttaccat
gtgcaattacaacagcagtatcacatgcagcagcaattgcaacaaactcagcaacagcag
catttacttggcctacagccacaagaagtctcccagacagatcagcaatcatttaaacaa
caggagcatcagccagaaaaaatggaggaagaagaacaaaggcagcacatgaaacaggat
tcttga
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integrated database retrieval system
