Cucurbita pepo subsp. pepo (vegetable marrow): 111783207
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Entry
111783207 CDS
T05351
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111783207
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111783207
Spliceosome [BR:
cpep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
111783207
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111783207
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
KTI12
6PF2K
Motif
Other DBs
NCBI-GeneID:
111783207
NCBI-ProteinID:
XP_023519874
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All DBs
Position
LG20:complement(2324172..2328681)
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AA seq
595 aa
AA seq
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MASIKRRHQEDDHEAKKAKISCVSDASELKGQHPVVLNPADCDLDFKIESDGLLGSALYE
QGFAYCWSGARATVGITGGKYCFGCKIISLQPVEMNDTAPDQQHLCRLGISIGDSPVGNL
GETKQSFGFGGTGKFSNAGKFSDYGEKFGIGDTIVCALNLESNPLASIGFSKNGKWLGTA
IQFDAGPRGLGVVDSPLGKLRWESALFPHVLLKNVEVQLQFSVEEGLVPEEGFKPWGTAL
DDNNALIGPTFNNVRDCEVMMMVGLPASGKSTWAKKWADQHPEKRYILLGTNLILDQMKL
PGLLRKHNYGQRFDCLMDQATGIFNILLSRAATIPRNYIIDQTNVYKNARKRKLKPFVYF
QKIAVVVFPRPEELQRRSAERFREMGKEVPADAVNEMLANFILPTSKNMPGSEEYFDEVI
FVELDRAESQRYLDGMKRALTSESRDNLTSFSKASTAPHVLPSSQNQGLRGVSDARQYGN
PRFISEVHQENMYSPLPRFVPLHRPYESLIGETRYPGPSSHPLHSYPGSDPYSIGGHFRD
SRQMGELFPREYADVAYSFPTTGPPYGTPPPRPAYQFPSNMPYGRGYASPRPRYY
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccattaaacgccgtcaccaagaagacgatcatgaggcgaagaaagccaaaatt
tcctgtgtttcagatgcttctgagttgaaggggcagcatccagtggtgctcaacccagcc
gactgcgacttggatttcaagattgaaagtgatggtcttctaggatcagctctttatgag
caaggttttgcttactgctggtccggtgctcgggccaccgttggtattactggtggaaaa
tattgttttggttgcaagattatctctttacagccagttgaaatgaatgatactgctcca
gatcagcagcatctttgtcgtctcggcatttccataggggacagtccagtgggtaatctt
ggagaaactaaacaaagttttggatttggtggcacaggaaagttctcaaatgctggaaaa
ttttctgactatggtgaaaagtttgggattggtgataccattgtttgtgctttaaatctt
gaaagcaatcctctggcctctattggattttccaaaaatggcaaatggttgggtactgca
atacaatttgatgccggtccaagaggccttggagtagtggattctccattggggaagctt
cgatgggaatcagcactttttcctcatgtattgttgaagaatgttgaggtccagttacaa
ttcagtgttgaagaggggcttgttccagaagaaggctttaaaccgtggggcactgctttg
gatgataacaatgcattgatagggcctacttttaataatgtaagagattgtgaagtcatg
atgatggtgggtctaccggcttctggaaaaagtacgtgggccaagaaatgggcagatcaa
catcctgagaaacgctatattttgcttgggactaatctaattctggatcaaatgaagttg
ccaggtctattgcgaaaacataattatggacaacgttttgattgtttgatggaccaagca
actgggattttcaacatacttctgtctagagcagctaccatacctcgcaattacataatt
gatcaaacaaatgtttacaaaaatgcccggaaacggaaactgaaaccatttgtgtacttc
cagaaaattgctgttgtggtattcccaaggcccgaggagttgcagcgtcgatcggctgaa
agatttagagaaatggggaaagaagtaccagctgatgcagtgaatgaaatgttagccaat
tttatcctgcccaccagcaagaacatgcctggttctgaagaatattttgatgaggttata
tttgtagaacttgatcgtgcagagtctcaaaggtatttggatgggatgaaacgtgctcta
acatctgaatcacgcgacaacttaacgtcattttctaaagctagtactgctcctcatgtt
ttaccttcatctcaaaatcaaggtctacgtggtgtatcagatgctagacaatatggaaat
ccaagatttatttctgaagtacatcaagaaaatatgtactctcctttacctaggtttgtt
ccccttcacagaccatacgagagtttgattggtgaaaccaggtaccctggtccaagtagc
catccgcttcacagttatccagggagtgatccttacagcattggtggacatttccgagac
agtcgtcaaatgggtgaactcttcccaagggaatacgctgatgtagcttattccttccct
accactggtccaccgtatgggaccccacctccaagacccgcatatcaatttccttctaat
atgccttatggtagaggttatgcctccccacgtccaaggtactactga
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