Cucurbita pepo subsp. pepo (vegetable marrow): 111783400
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Entry
111783400 CDS
T05351
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111783400
Enzymes [BR:
cpep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111783400
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
111783400
NCBI-ProteinID:
XP_023520094
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Position
LG20:complement(184149..186235)
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AA seq
379 aa
AA seq
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MGATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGK
MTNNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMMKSKVWITFQKDMHILLHKPLLISS
YTAIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDG
DAIRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRD
MNMRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIA
SKSKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKW
VRSLTSSSGALRCSSKSRC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccacccaactctttgttctgtctcttatttcccttactctcctctccgcagtt
tcttattcagaaggcaatgggttgaagatgaacgccattgacagatgctggagatcgaac
ccgtactggaggagaaacaggcaacaactgggcgtttgctcggtgggtttcgttggaaaa
atgaccaacaacgtcggaagaaatctcatacgctaccaagtcaccgaccctagcgacgac
cctataaatccacgcccaggtacactccgatacggcgccacaatgatgaagtccaaagtc
tggatcaccttccaaaaagacatgcacatccttctccacaagccgcttctcataagcagc
tacacagccatcgacgggcgaggggccagcgtccacatctccgggaatgcatgcctggtg
gtctccaaggccaccaacatcattatccacggccttatcattcaccactgcaaggctcag
ggcgcaggccaagtcatgggccctaattccaagttggtttcactcggacacgtggacggc
gatgccattcgtttagtttcagcctccaaagtctggattgaccacaacacactgtaccgt
tgcgaggatgggcttctcgacgtcaccagaggctccactgacatcaccatttccaacaat
tggttccgcgaccaagacaaggttattcttctcggccacgaggacggctatgtccgagac
atgaacatgagagtcactgtggtctataaccattttggacccaactgcaaccaaaggatg
cccaggatccggcatgggtatgcgcacgtggcgaacaatttgtaccaaggatggacgcaa
tacgcaattggagggagcatgaatccaagcgtcaagagtgaagccaacctgttcatcgca
tcaaaatcaaaacagattgtatggagcaccgggaaagtagaggcggcaaaatggaagttt
cattccgtaagagacgtttttgaaaacggagcttcctttggacagataggtgtggggcga
ggaggcgtaaagccaaattacagcgcccagcagcggtttccagtggctgatgctaagtgg
gtgagatcattgacaagctcctcgggggctctacgctgctcgtcaaaatcaagatgttga
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