Cucurbita pepo subsp. pepo (vegetable marrow): 111783698
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Entry
111783698 CDS
T05351
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111783698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111783698
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111783698
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
111783698
NCBI-ProteinID:
XP_023520384
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Position
LG20:4189471..4193988
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AA seq
510 aa
AA seq
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MNTSCFIESMFSVAFLGLIGFVLVLLKAKGVGMDPGKLFIGGISWDTDEDRLREYFQSFG
EVVEVMIMRDRTTGRARGFGFVVFADPVVAARVVLEKHVIDGRTVEAKKAVPRDDQNVLS
RNNTGILGSPGPTRTKKIFVGGLASTVTESDFKTYFDQFGTITDVVVMYDHNTQRPRGFG
FITYESEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRSQLGAYPYGFGRVGSYLN
GYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGLSPISPGYGIGLNLETGLNPNYGTGLNVG
SNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGNGGNGSILSSSVQNLWGNVGNSVGTNSSH
LRTFPGSGGVHTGTNSLNGIGGLWGASASLVHGEHSGSPFNAVNLDFASGDGSLTSGTTV
GYARSVGTNVSSASLYSAPNIYDEVHGNNDEGNSFYGHSSWQLLPTELEDSSSVGFGLGN
AASDVISRNNGGYTVGYGVSNRQSNRGIAA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttcctgtttcatcgaatccatgttttctgtagcttttttaggattgatcggt
tttgtgcttgttcttctgaaggcgaagggagtgggcatggatcctggcaagcttttcatt
ggtgggatttcgtgggacacggatgaagatcgtcttcgagagtattttcagagctttggg
gaagtggtggaggtgatgatcatgagggatcggaccactggccgtgctcgtggctttggt
ttcgtcgtctttgctgaccctgttgttgcagcaagagttgtattggaaaagcatgtgatt
gatggaagaactgttgaagcaaagaaggctgttcctcgagacgatcaaaacgttttgagc
aggaacaataccggtatccttgggtcaccaggtcctactcgcacgaaaaagatattcgta
ggaggtttggcatcaactgttacggagagtgacttcaaaacatattttgatcagtttgga
acaatcacagacgtcgtggtgatgtacgatcataatactcagagaccgagaggtttcgga
tttatcacttacgagtccgaggaatcggtggagaaagttttatacaaaacttttcatgaa
ctcaatggtaaaatggttgaggttaagagggctgttccaaaggaatcatcaccagtgcca
aaccgaagtcaattaggtgcatacccttatggttttggtagagttggtagctatttaaat
ggctataatcaaggatataacccgacctcggttggggcatatggattgagatctgatgat
aggtttagtcctgttacagttggtcggggtggactttctccgatcagtcctggttatgga
atcgggctaaatctcgaaacagggttgaacccaaactatgggacaggtctcaatgttggc
tctaaccttagctatggacgagtaatgagcccctcgtatggtggaaatttgaataggtat
ggtagcccgaaccccatggtgtatggtggtggcaatggaggtaatggttcgattttaagc
tcgtcggttcagaatctgtggggaaacgtcgggaactctgttggtacaaactcgtcacac
ttgaggacttttcctggctctggtggtgtgcatacaggaactaattcgttgaacggtatc
ggagggctttggggtgcgtctgcaagtctagttcatggggaacattctggttctccattc
aatgctgttaatctcgactttgcgagcggtgatggcagcttaacgtcgggaacgactgta
ggttatgctagaagcgttggaactaatgtttcctcagcatctttgtactctgcaccaaat
atatatgatgaggttcatgggaacaatgatgaaggaaactcattttatgggcattccagt
tggcagttgttaccgaccgagctcgaggattcttcgtcggttggtttcgggcttgggaat
gctgcttcggatgttattagtagaaacaatggtggttatactgtcggatacggtgtttct
aatagacaatctaatagaggaattgctgcttag
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