Cucurbita pepo subsp. pepo (vegetable marrow): 111784211
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Entry
111784211 CDS
T05351
Name
(RefSeq) protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111784211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111784211
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
111784211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vta1
Vta1_C
Motif
Other DBs
NCBI-GeneID:
111784211
NCBI-ProteinID:
XP_023520761
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MATETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNALLISLM
NQLEKDKKSLSLGPDDSLHLEGFALNVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ
FGPLQPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSAPTTTANDASPA
EPEFFRTQSLSDSLPQVHDMVNDDHVNIPQTPQVYDNMNNHTSLNTSPPTRFHNEVDNHQ
HPPNIPSYPASGYPSHDFHLPPTRNEPDVSSYSQPFHHVQSYSQEPQQQPLPHNYPSDET
SQNYSYPHFQSYPSFSESSLPAAPSHNLNYYHGSDSSYSSQVTPPPASYPSASQYHSNGR
DGTTLEPQPAPAPTKSYHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSIAVEHLKKSL
ELLTNPSANL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgagaccgagccggcgaagctccttctaccctatctccagcgagcggacgaa
ttgcagaagcatgaacctcttgtcgcatattactgtcgattatatgctatggaacgcgga
cttaagattccacagggcgagcgtaccaagactacaaatgccctccttatttccctcatg
aatcagcttgaaaaggataagaagtcactcagcctggggcctgatgatagtttgcatctt
gagggctttgcattgaatgtctttgcaaaagcagacaaacaagatcatgctggacgagcg
gatttgaacactgcaaaaacattttatgctgcaagcattttctttgagattatttctcag
tttggtccacttcaaccagacctggagcaaaaacggaaatatgcagtctggaaagcagca
gatatcaggaaggctttgaaagagggaaggaagccacagcctggtccaccttccggtgac
gaagatctctctgttccttcaagtgcacctactaccactgcaaatgacgcaagtccagca
gagcccgagttcttcagaactcaatcgctatcagattcgttacctcaggttcatgatatg
gttaatgatgatcatgtaaatatcccacaaactcctcaggtctatgacaacatgaacaac
cacacttctttaaacacgtctccacccacccgattccataatgaagtcgataatcaccag
caccctccaaatattccatcatacccagcatctggttatccatcccatgattttcatcta
cctcctaccaggaatgaaccagatgtttcctcttattctcagccattccaccacgtacaa
tcctactcacaagagcctcaacaacagcctttgcctcataactatccttctgatgaaacc
tcccaaaattactcctatccccattttcaatcttatccaagtttctcggaaagcagcctc
ccagcggccccttctcacaatctgaactattaccatggttccgattcttcatactcttct
caagtgacccctcctcctgctagctacccatcagcttcccaatatcattcaaatggcaga
gacgggacgacgttggaacctcaacctgccccggctccaaccaagtcgtaccattacgac
agcaactaccagccacctcctgagaaaatcgctgaggcacacaaggctgcgaggtttgct
gtaggggctctggcgtttgatgatgtttcaattgcagtagagcacttgaagaaatcactg
gaattgttgactaacccttcagccaatctgtga
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