Cucurbita pepo subsp. pepo (vegetable marrow): 111784400
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Entry
111784400 CDS
T05351
Name
(RefSeq) small nuclear ribonucleoprotein E-like
KO
K11097
small nuclear ribonucleoprotein E
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111784400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111784400
03041 Spliceosome [BR:
cpep03041
]
111784400
03032 DNA replication proteins [BR:
cpep03032
]
111784400
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
111784400
Spliceosome [BR:
cpep03041
]
Complex A
U1 snRNP components
Sm proteins
111784400
U2 snRNP components
111784400
Complex B
U1 snRNP components
111784400
U4/U6.U5 tri-snRNP components
111784400
Complex C
U2 snRNP components
111784400
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111784400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
111784400
NCBI-ProteinID:
XP_023520877
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV
NVKKKSKKSLGRILLKGDNITLMMNTGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccaaagttcagaggattatgacccaacccatcaacttgattttcaggttc
cttcagagtaaagctcggattcagatatggctttttgagcagaaagacctgaggatcgaa
ggccgaatcattggctttgatgaatatatgaatttggtgttggatgatgccgaggaggtc
aatgtgaagaagaagagcaagaagagtttagggaggatattgctcaaaggagataacata
actctgatgatgaacacggggaagtga
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