Cucurbita pepo subsp. pepo (vegetable marrow): 111784418
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Entry
111784418 CDS
T05351
Name
(RefSeq) DNA topoisomerase 1 alpha-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpep03032
]
111784418
Enzymes [BR:
cpep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
111784418
DNA replication proteins [BR:
cpep03032
]
Eukaryotic type
DNA Topoisomerases
111784418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Fn3_PTPRU
C2c1_Nuc-II
Motif
Other DBs
NCBI-GeneID:
111784418
NCBI-ProteinID:
XP_023520897
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MAIETFGKAPMFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ
SSNAQNRTTSLPKTSPMKSSEVGTQKASNSSTQAPPVKSPGTTLKVSDSTDSQSKHLVKA
AVKEESDRHPTNESSDSEDDKPLSFRLKGNSNPPGKGLVPTVLKNKVEKSSGDSDDEIPL
SSKFHMKSTSRVSGGNQHGFDEKKPLISKVHQNGLTSGDKLQKPGVISSKRPLPNADSHS
SPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDDDDHIPISQRMKKVVAVSANKSLSSKK
TVSKVVSSSMKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTH
GVKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQNLD
DCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPP
GLFRGRGEHPKMGKLKRRIHPKDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWN
DPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIA
VATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVE
VELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDML
NRGSKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKI
DLDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTS
KINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggctattgagacttttggaaaagcgccaatgtttgacgaggatgatgaggacaacatg
ccaatagtgttcaaaaggagtagtgcatctaggcaaaatcagttagattctgaagctaaa
cagaggttgaataagttgtccgggaggcagggttctgatgtatgttcagccaatggccaa
agctctaatgctcaaaacaggacgacttcattgccaaagacatcgcccatgaaatcatct
gaagtaggaactcagaaagcatccaattcctctacccaggcaccacctgtgaaatcacca
ggcacaactttaaaagtttcagattctacggatagtcaatcaaaacatttggtaaaggct
gctgtgaaagaggagagtgataggcatcctactaatgaaagtagtgactctgaagatgat
aaaccattgagttttagattgaaagggaattccaacccccctggtaaagggcttgtacca
acggtactaaagaataaggtcgaaaaatcgtcaggagattctgatgatgaaattcctctg
tcatcaaaatttcacatgaagtctacttcacgggtatctggtggtaatcaacatggtttt
gatgaaaagaaaccattgatttcaaaagttcatcagaatggtttgacctcaggggataag
ctccaaaagcctggtgttatttccagcaagagacctcttcctaatgcagattcccattcc
tcgcctcaattttcatcaaaaaagccaaaactttcagactcatctactcctttgggtagt
aagctagtatcagtgaaagcaaaacaagaagtagatgacgacgatgaccatattcctatt
tcacagagaatgaagaaggtggtggctgtatcagcgaataagtcattaagttctaagaaa
acagtttcaaaagttgtttcgtcttcaatgaagaaaacattgaagaaatccaaaaagcca
gtcaagaaatctaaatatgtcaagtccacgaagttgctgcccagttccggcgatggacag
aaaaaatggactagcttggttcataatggtgtcattttcccacctccataccagactcat
ggagtgaagatgatttataaggggaagcttgttgatttgactcctgaacaagaggaggtt
gcaaccatgtttgctgtgatgaaggatacagattatatgcaaaaacctaaattcaaagaa
aatttctggaatgactggcggaaattacttgggaaaaaccatgtcattcaaaatctggat
gattgtgatttcaccccaatatatgactggtatcagacagaaaaggagaagaagaaacag
atgactacagaagagaagaaagctctgaaggaggagaaaatgaaacaagaggagaagtac
atgtgggctattcttgatggggttaaggagaaggtaggaaacttcagagttgaaccgcct
ggattatttcgaggtcgtggagaacatccaaagatggggaagttgaaaagacgcattcac
cccaaagacatcacaattaatatcggaaaagatgctccgatccctgaatgccctatacct
ggtgaaaggtggaaggaagtaagacatgacaatacggttacatggttggctttctggaac
gatccaataaatccaaaagaattcaaatatgtgttcctggcggctagtagttcattgaaa
ggacagagtgacaaggagaagtacgagaaagcaaggaagctcaaggactacataaaaaac
ataaggaatgcttatacaaaggattttacaagcaaagatcctacacgaaggcaaattgca
gttgctacttatctcattgataaactagctcttagggctgggaatgagaaagacgatgat
gaagctgatacggttggctgctgtacacttaaagtagagaatgtcaaagcagtacctcca
aatcttctggagttcaatttcctcggtaaagattcaatcaagtatgaaaatactgttgag
gttgagctccctgtattcaaagcgatcacacaatttcaaagtggaaaaagtggaactgat
gatctttttgacaagctggatacaagtaaattaaacgctcatctgaaggatctcatgccc
ggtctcaccgcaaaagtgtttcgtacatataatgcttctatcacacttgatgacatgtta
aacagaggaagtaaagacggagacgttgcagaaaagattgtcatttaccagcacgcaaac
aaggaggttgcaattatttgtaatcaccagcggactgtttcaaaatctcatggagcgcaa
atgtcgagattaaatgagaagatctctgagctcagggatattctgaaagagctgaaaatt
gatcttgatagagcaaagaaaggaaagccccctttaaaagatgctgatggaaagcaaaag
aggaatttgacgcctgaagtgttagagaagaagatatcccaaacaaatgcaaagatcgag
aagatagagcgagatatgcagactaaagaggatttgaaaaccgtggcattgggaacgtca
aagatcaactacctcgatcctcgaatcacagtcgcatggtgcaagcgtcatgaagtccct
atcgaaaagatattcaacaagtctcttctagcaaagtttgcgtgggcaatggacgtggat
cccgacttcagattctga
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